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Lab 5 DNA Sequences

The Following Sequences are intended for Lab 5: Bioinformatics. If you are unable to download the sequences using the links below, Contact Us to request that they be sent over email.

Module I: Sanger Sequence Analysis

 

Module II: NCBI Sequence Taxonomy and BLAST Searching

Wolbachia Sequence for BLAST Search (.fasta file)

GTTGCAGCAATGGTAGACTCAACGGTAGCAATAACTGCAGGACCTAGAGGAAAAACAGTAGGGATTAAT

AAGCCCTATGGAGCACCAGAAATTACAAAAGATGGTTATAAGGTGATGAAGGGTATCAAGCCTGAAAAA

CCATTAAACGCTGCGATAGCAAGCATCTTTGCACAGAGTTGTTCTCAATGTAACGATAAAGTTGGTGATG

GTACAACAACGTGCTCAATACTAACTAGCAACATGATAATGGAAGCTTCAAAATCAATTGCTGCTGGAAA

CGATCGTGTTGGTATTAAAAACGGAATACAGAAGGCAAAAGATGTAATATTAAAGGAAATTGCGTCAATG

TCTCGTACAATTTCTCTAGAGAAAATAGACGAAGTGGCACAAGTTGCAATAATCTCTGCAAATGGTGATA

AGGATATAGGTAACAGTATCGCTGATTCCGTGAAAAAAGTTGGAAAAGAGGGTGTAATAACTGTTGAAG

AGAGTAAAGGTTCAAAAGAGTTAGAAGTTGAGCTGACTACTGGCATGCAATTTGATCGCGGTTATCTCTC

TCCGTATTTTATTACAAATAATGAAAAAATGATCGTGGAGCTTGATAATCCTTATCTATTAATTACAGAGA

AAAAATTAAATATTATTCAACCTTTACTTCCTATTCTTGAAGCTATTGTTAAATCTGGTAAACCTTTGGTTA

TTATTGCAGAGGATATCGAAGGTGAAGCATTAAGCACTTTAGTTATCAATAAATTGCGTGGTGGTTTAAA

AGTTGCTGCAGTAAAAGCTCCAGGTTTTGGTGACAGAAGAAAGGAGATGCTCGAAGACATAGCAACTTTA

ACTGGTGCTAAGTACGTCATAAAAGATGAACTT

 

Module III: Phylogenetics

Example Wolbachia Sequences

If your arthropod was uninfected, use one of the following sequences to complete Module III.


 

FASTA Reference Sequences for Wolbachia Phylogenetics

The .fasta file below includes representative sequences from Wolbachia Supergroups A, B, C, D, E, F, and an outgroup, Ehrlichia chaffeensis. To add/remove sequences, open the file using a TextEditor or genomics software.


 

Unknown Arthopod Sequences

The .fasta files below include unknown arthropod sequences for Module III: Arthropod Phylogenetics.


 

FASTA Reference Sequences for Arthropod Phylogenetics

The .fasta files below include representative sequences from Arthropods and an outgroup, the tardigrade Hypsibius pallidoides. To add/remove sequences, open the file using a TextEditor or genomics software.