Publications

2023
Li L, Mazomenos E, Chandler JH, Obstein KL, Valdastri P, Stoyanov D, Vasconcelos F Robust endoscopic image mosaicking via fusion of multimodal estimation. Med Image Anal. 2023 Feb;84:102709. doi: 10.1016/j.media.2022.102709
Arnold TC, Kini LG, Bernabei JM, Revell AY, Das SR, Stein JM, Lucas TH, Englot DJ, Morgan VL, Litt B, Davis KA Remote effects of temporal lobe epilepsy surgery: Long-term morphological changes after surgical resection. Epilepsia Open. 2023 Jun;8(2):559-570. doi: 10.1002/epi4.12733
Cronin A, Tkaczyk ER, Hussain I, Bowden A, Saknite I Effect of camera distance and angle on color of diverse skin tone-based standards in smartphone photos. J Biophotonics. 2023 Jun;16(6):e202200381. doi: 10.1002/jbio.202200381
Schlunk S, Hsi R, Byram B Enhancing sizing accuracy in ultrasound images with an alternative ADMIRE model and dynamic range considerations. Ultrasonics. 2023 May;131:106952. doi: 10.1016/j.ultras.2023.106952
Prasad K, Miller A, Sharif K, Colazo JM, Ye W, Necker F, Baik F, Lewis JS Jr, Rosenthal E, Wu JY, Topf MC. Augmented-Reality Surgery to Guide Head and Neck Cancer Re-resection: A Feasibility and Accuracy Study. Ann Surg Oncol. 2023 Aug;30(8):4994-5000. doi: 10.1245/s10434-023-13532-1. Epub 2023 May 3. PMID: 37133570.
Li Y, Reed A, Kavoussi N, Wu JY. Eye gaze metrics for skill assessment and feedback in kidney stone surgery. Int J Comput Assist Radiol Surg. 2023 Jun;18(6):1127-1134. doi: 10.1007/s11548-023-02901-6. Epub 2023 May 18. PMID: 37202714.
Setia SA, Stoebner ZA, Floyd C, Lu D, Oguz I, Kavoussi NL. Computer Vision Enabled Segmentation of Kidney Stones During Ureteroscopy and Laser Lithotripsy. J Endourol. 2023 Apr;37(4):495-501. doi: 10.1089/end.2022.0511. Epub 2023 Mar 10. PMID: 36401503.
Yu T, Cai L, Torrisi S, Vu A, Morgan V, Goodale S , Ramadass K , Meisler S, Lv J, Warren A, Englot D, Cutting L, Chang C, Gore J, Landman B, Schilling K Distortion correction of functional MRI without reverse phase encoding scans or field maps Magnetic Resonance Imaging, Volume 103, 2023, Pages 18-27, ISSN 0730-725X
Sainburg L, Janson A, Johnson G, Jiang J, Rogers B, Chang C, Englot D, Morgan V Structural disconnection relates to functional changes after temporal lobe epilepsy surgery Brain, awad117 05 April 2023
Nashiro, K., Min, J., Yoo, H.J Cho C, Bachman S, Dutt S, Thayer J, Lehrer P, Feng T, Mercer N, Nasseri P, Wang D, Chang C, Marmarelis V, Narayanan S, Nation D and Mather M Increasing coordination and responsivity of emotion-related brain regions with a heart rate variability biofeedback randomized trial. Cogn Affect Behav Neurosci 23, 66–83 (2023). https://doi.org/10.3758/s13415-022-01032-w
Cui C, Yang H, Wang Y, Zhao S, Asad Z, Coburn LA, Wilson KT, Landman BA, Huo Y. Deep multimodal fusion of image and non-image data in disease diagnosis and prognosis: a review. Prog Biomed Eng (Bristol). 2023 Apr 11;5(2):10.1088/2516-1091/acc2fe. doi: 10.1088/2516-1091/acc2fe. PMID: 37360402; PMCID: PMC10288577.
Donnici C, Long X, Reynolds J, Giesbrecht GF, Dewey D, Letourneau N, Huo Y, Landman B, Lebel C Prenatal depressive symptoms and childhood development of brain limbic and default mode network structure. Hum Brain Mapp. 2023 Apr 15;44(6):2380-2394. doi: 10.1002/hbm.26216
Grossarth S, Mosley D, Madden C, Ike J, Smith I, Huo Y, Wheless L Recent Advances in Melanoma Diagnosis and Prognosis Using Machine Learning Methods. Curr Oncol Rep. 2023 Jun;25(6):635-645. doi: 10.1007/s11912-023-01407-3
Xu K, Li T, Khan MS, Gao R, Antic SL, Huo Y, Sandler KL, Maldonado F, Landman BA. Body composition assessment with limited field-of-view computed tomography: A semantic image extension perspective. Med Image Anal. 2023 Aug;88:102852. doi: 10.1016/j.media.2023.102852. Epub 2023 May 27. PMID: 37276799
Bolton CJ, Khan OA, Moore EE, Pechman KR, Taylor Davis L, Liu D, Landman BA, Gifford KA, Hohman TJ, Jefferson AL. Baseline grey matter volumes and white matter hyperintensities predict decline in functional activities in older adults over a 5-year follow-up period. Neuroimage Clin. 2023;38:103393. doi: 10.1016/j.nicl.2023.103393. Epub 2023 Mar 29. PMID: 37003129; PMCID: PMC10102557.
Schilling KG, Archer D, Yeh FC, Rheault F, Cai LY, Shafer A, Resnick SM, Hohman T, Jefferson A, Anderson AW, Kang H, Landman BA. Short superficial white matter and aging: a longitudinal multi-site study of 1293 subjects and 2711 sessions. Aging Brain. 2023;3:100067. doi: 10.1016/j.nbas.2023.100067. Epub 2023 Jan 16. PMID: 36817413; PMCID: PMC9937516.
Paez R, Kammer MN, Balar A, Lakhani DA, Knight M, Rowe D, Xiao D, Heideman BE, Antic SL, Chen H, Chen SC, Peikert T, Sandler KL, Landman BA, Deppen SA, Grogan EL, Maldonado F. Longitudinal lung cancer prediction convolutional neural network model improves the classification of indeterminate pulmonary nodules. Sci Rep. 2023 Apr 15;13(1):6157. doi: 10.1038/s41598-023-33098-y. PMID: 37061539; PMCID: PMC10105767.
Yang Y, Schilling K, Shashikumar N, Jasodanand V, Moore EE, Pechman KR, Bilgel M, Beason-Held LL, An Y, Shafer A, Risacher SL, Landman BA, Jefferson AL, Saykin AJ, Resnick SM, Hohman TJ, Archer DB; Alzheimer's Disease Neuroimaging Initiative. White matter microstructural metrics are sensitively associated with clinical staging in Alzheimer's disease. Alzheimers Dement (Amst). 2023 May 17;15(2):e12425. doi: 10.1002/dad2.12425. PMID: 37213219; PMCID: PMC10192723
Moyo TK, Kishtagari A, Villaume MT, McMahon B, Mohan SR, Stopczynski T, Chen SC, Fan R, Huo Y, Moon H, Tang Y, Bejan CA, Childress M, Anderson I, Rawling K, Simons RM, Moncrief A, Caza R, Dugger L, Collins A, Dudley CV, Ferrell PB, Byrne M, Strickland SA, Ayers GD, Landman BA, Mason EF, Mesa RA, Palmer JM, Michaelis LC, Savona MR. PI3K Inhibition Restores and Amplifies Response to Ruxolitinib in Patients with Myelofibrosis. Clin Cancer Res. 2023 Jul 5;29(13):2375-2384. doi: 10.1158/1078-0432.CCR-22-3192.
Kanakaraj P, Cai LY, Rheault F, Yehe FC, Rogers BP, Schilling KG, Landman BA. Mapping the impact of nonlinear gradient fields with noise on diffusion MRI. Magn Reson Imaging. 2023 May;98:124-131. doi: 10.1016/j.mri.2023.01.004
Newlin NR, Rheault F, Schilling KG, Landman BA. Characterizing Streamline Count Invariant Graph Measures of Structural Connectomes. J Magn Reson Imaging. 2023 Feb 24. doi: 10.1002/jmri.28631.
Kerley CI, Nguyen TQ, Ramadass K, Cutting LE, Landman BA, Berger M. pyPheWAS Explorer: a visualization tool for exploratory analysis of phenome-disease associations. JAMIA Open. 2023 Apr 3;6(1):ooad018. doi: 10.1093/jamiaopen/ooad018
Bown CW, Khan OA, Liu D, Remedios SW, Pechman KR, Terry JG, Nair S, Davis LT, Landman BA, Gifford KA, Hohman TJ, Carr JJ, Jefferson AL Enlarged perivascular space burden associations with arterial stiffness and cognition. Neurobiol Aging. 2023 Apr;124:85-97. doi: 10.1016/j.neurobiolaging.2022.10.014
Cai LY, Lee HH, Newlin NR, Kim ME, Moyer D, Rheault Fß, Schilling KG, Landman BA. Implementation considerations for deep learning with diffusion MRI streamline tractography. bioRxiv. 2023 Apr 6:2023.04.03.535465. doi: 10.1101/2023.04.03.535465
Banalagay RA, Labadie RF, Noble JH. Validation of active shape model techniques for intracochlear anatomy segmentation in computed tomography images. J Med Imaging (Bellingham). 2023 Jul;10(4):044003. doi: 10.1117/1.JMI.10.4.044003
Cass ND, Mason HG, Khan MM, Lindquist NR, Noble JH, Tawfik KO. Endoscope-Assisted Visualization of the Internal Auditory Canal Using the Middle Fossa Approach. Otol Neurotol. 2023 Jul 7. doi: 10.1097/MAO.0000000000003951.
Ferguson, J., Ertop, T., Herrell, S., & Webster, R. (2023). Unified robot and inertial sensor self-calibration. Robotica, 41(5), 1590-1616. doi:10.1017/S0263574723000012
Heiselman JS, Ecker BL, Langdon-Embry L, O'Reilly EM, Miga MI, Jarnagin WR, Do RKG, Horvat N, Wei AC, Chakraborty J. Registration-based biomarkers for neoadjuvant treatment response of pancreatic cancer via longitudinal image registration. J Med Imaging (Bellingham). 2023 May;10(3):036002. doi: 10.1117/1.JMI.10.3.036002. Epub 2023 Jun 2.
Ringel MJ, Richey WL, Heiselman JS, Meszoely IM, Miga MI. Incorporating heterogeneity and anisotropy for surgical applications in breast deformation modeling. Clin Biomech (Bristol, Avon). 2023 Apr;104:105927. doi: 10.1016/j.clinbiomech.2023.105927. Epub 2023 Feb 27
Paulo, D, Narasimhan S, Gonzalez H, Allen J, Li R, Rodriguez W, Konrad P, Neimat J, Shah H, Bick S, Dawant BM, Englot D Value of Atlas-Based Data and Intraoperative Testing in Deep Brain Stimulation Neurodurgery 69(Supplement_1):p23-24, April 2023
Smetak M, Fernando S, O’Malley M, Bennett M, Haynes D, Wootten C, Virgin F, Dwyer R, Dawant BM, Noble J, and Labadie R Electrode array positioning after cochlear reimplantation from single manufacturer Cochlear Implants International 22 Feb 2023
Berg K, Chen, C, Noble J, Dawant BM, Dwyer R, Labadie R, and Gifford R Effects of the Number of Channels and Channel Stimulation Rate on Speech Recognition and Sound Quality Using Precurved Electrode Arrays AJA Vol 32, Issue 2 June 2023 Pages 403-416
Cass ND, Fan Y, Lindquist NR, Dawant BM, Tawfik KO Automated Whole Cochlear T2 Signal Demonstrates Weak Correlation with Hearing Loss in Observed Vestibular Schwannoma. Audiol Neurootol. 2023 Jun 15:1-11. doi: 10.1159/000530567.
Patro A, Perkins EL, Ortega CA, Lindquist NR, Dawant BM, Gifford R, Haynes DS, Chowdhury N. Machine Learning Approach for Screening Cochlear Implant Candidates: Comparing With the 60/60 Guideline. Otol Neurotol. 2023 Aug 1;44(7):e486-e491. doi: 10.1097/MAO.0000000000003927.
Li TZ, Hin Lee H, Xu K, Gao R, Dawant BM, Maldonado F, Sandler KL, Landman BA. Quantifying emphysema in lung screening computed tomography with robust automated lobe segmentation. J Med Imaging (Bellingham). 2023 Jul;10(4):044002. doi: 10.1117/1.JMI.10.4.044002
McNeil AJ, House DW, Mbala-Kingebeni P, Mbaya OT, Dodd LE, Cowen EW, Nussenblatt V, Bonnett T, Chen Z, Saknite I, Dawant BM, Tkaczyk ER. Counting Monkeypox Lesions in Patient Photographs: Limits of Agreement of Manual Counts and Artificial Intelligence. J Invest Dermatol. 2023 Feb;143(2):347-350.e4. doi: 10.1016/j.jid.2022.08.044
Parks K, Liu X, Reasat T, Khera Z, Baker LX, Chen H, Dawant BM, Saknite I, Tkaczyk ER. Non-Expert Markings of Active Chronic Graft-Versus-Host Disease Photographs: Optimal Metrics of Training Effects. J Digit Imaging. 2023 Feb;36(1):373-378.
Johnson GW, Doss DJ, Morgan VL, Paulo DL, Cai LY, Shless JS, Negi AS, Gummadavelli A, Kang H, Reddy SB, Naftel RP, Bick SK, Williams Roberson S, Dawant BM, Wallace MT, Englot DJ. The Interictal Suppression Hypothesis in focal epilepsy: network-level supporting evidence. Brain. 2023 Jul 3;146(7):2828-2845. doi: 10.1093/brain/awad016.
Donnici, C, Long, X, Reynolds, J, Giesbrecht, G, Dewey, D, Letourneau, N, Huo, Y, Landman, B, Lebel, C Prenatal depressive symptoms and childhood development of brain limbic and default mode network structure Human Brain Mapping 2023 10659471
Johnston G, Orekhov A, Simaan N Design Considerations and Robustness to Parameter Uncertainty in Wire-Wrapped Cam Mechanisms J. Mechanisms Robotics 1 – 14, Jan 4, 2023
Schilling K, Fadnavis S, Batson J, Visagie M, Combes A, By S, Bagnato F, Garyfallidis E, Landman B, Smith S, Grady K Denoising of diffusion MRI in the cervical spinal cord – effects of denoising strategy and acquisition on intra-cord contrast, signal modeling, and feature conspicuity NeuroImage Volume 266, 1 February 2023, 119826
Li J, Chen J, Tang Y, Wang C, Landman B, Zhou S.K. Transforming medical imaging with Transformers? A comparative review of key properties, current progresses, and future perspectives Medical Image Analysis Vol 85, April 2023
Johnson G, Doss D, Morgan V, Paulo D, Cai L, Shless J, Negi A, Gummadavelli A, Kang H, Reddy D, Naftel R, Bick S, Roberson S, Dawant B, Wallace M, Englot D, The interictal suppression hypothesis in focal epilepsy: network-level supporting evidence, Brain, 2023
Liu Y, Bao S, Englot D, Morgan V, Taylor W, Wei Y, Oguz I, Landman B, Lyu I Hierarchical particle optimization for cortical shape correspondence in temporal lobe resection Computers in Biology and Medicine Vol 152 Jan 2023, 106414
Zhang S, Goodale S, Gold B, Morgan V, Englot D, Chang C Vigilance associates with the low-dimensional structure of fMRI data Neurolmage Vol 267, Feb 2023
Aboud K, Nguyen T, Del Tufo S, Chang C, Zald D, Key A, Price G, Landman B, Cutting L Rapid interactions of widespread brain networks characterize semantic cognition Journal of Neuroscience 4 January 2023, 43 (1) 142-154
Smetak M, Riojas K, Whittenbarger N, Noble J, Labadie R Dynamic Behavior and Insertional Forces of a Precurved Electrode Using the Pull-Back Technique in a Fresh Microdissected Cochlea Otology & Neurotology ():10.1097/MAO.0000000000003812, January 18, 2023
Dorent R, KujawaA, Ivory M, Bakas S, Rieke N, Joutard S, Glocker B, Cardoso J, Modat M, Batmanghelich K, Belkov A, Baldeon Calisto M, WonChoi J, Dawant B, Dong H, Escalera S, Fan Y, Hansen L, Heinrich M, Joshi S, Kashtanova V, GyuKim H, Kondo S, Kruse C, Lai Yuen, S, Liu H, LyB, Oguz I, Shin H, Shirokikh B, Su Z, Wang G, Wu J, Xu Y, Yao K, Zhang L, Ourselin S, Shapey J, Vercauteren T CrossMoDA 2021 challenge: Benchmark of cross-modality domain adaptation techniques for vestibular schwannoma and cochlea segmentation Medical Image Analysis Medial Image Analysis Vol 83, January 2023, 102628
2022
Beason-Held, Lo, Kerley, Chaganti, S, Moghekar, A, Thambisetty, M, Ferrucci, Resnick, S, Landman, B Health Conditions Associated with Alzheimer's Disease and Vascular Dementia Annals of Neurology 2022 03645134
Gao R, Li T, Tang Y, Xu K, Khan M , Kammer M, Antic S, Deppen S, Huo Y,. Lasko T, Sandler K, Maldonado F, Landman B Reducing uncertainty in cancer risk estimation for patients with indeterminate pulmonary nodules using an integrated deep learning model Computers in Biology and Medicine, Volume 150, 2022
Ahmed R, Boyd B, Elson D, Albert K, Begnoche P, Kang H, Landman B, Szymkowicz S, Andrews P, Vega J, Taylor W Influences of resting-state intrinsic functional brain connectivity on the antidepressant treatment response in late-life depression Psychological Medicine 1-10 Dec 2022
Ahmed R, Ryan C, Christman S, Elson D, Bermudez C, Landman B, Szymkowicz S, Boyd B, Kang H, Taylor W Structural MRI-Based Measures of Accelerated Brain Aging do not Moderate the Acute Antidepressant Response in Late-Life Depression The American Journal of Geriatric Psychiatry Volume 30, Issue 9, September 2022, Pages 1015-1025
Erickson K, Farmer R, Merritt J, Lanaghan Z, Does M, Ramadass K, Landman B, Cuttign L, Neul J Behavioral and brain anatomical analysis of Foxg1 heterozygous mice PLOS One Oct 2022
Radwan A, Sunaert S, Schilling K, Descoteaux M, Landman B, Vandenbulcke M, Thyes T, Dupont P, Emsell L An atlas of white matter anatomy, its variability, and reproducibility based on constrained spherical deconvolution of diffusion MRI NeuroImage Volume 254, 1 July 2022, 119029
Yoon K, Archer D, Clarke M, Smith S, Oguz I, Cutter G, Xu J, Bagnato F Transcallosal and Corticospinal White Matter Disease and Its Association With Motor Impairment in Multiple Sclerosis Front Neurol. 2022; 13: 811315
Cass N, Lindquist N, Zhu Q, Li H, Oguz I, Tawfink K Machine Learning for Automated Calculation of Vestibular Schwannoma Volumes Otology & Neurotology, Volume 43, Number 10, 3 December 2022, pp. 1252-1256(5)
Setia S, Stoebner Z, Floyd C, Lu D, Oguz I, Kavoussi N Computer Vision Enabled Segmentation of Kidney Stones During Ureteroscopy and Laser Lithotripsy Journal of Endourology. Nov 2022
Stoebner Z, Hett K, Lyu I, Johnson H, Paulsen J, Long J, Oguz I Comprehensive shape analysis of the cortex in Huntington's disease Human Brain Mapping Nov 2022
Key A, Yan Y, Meteklo M, Chang C, Kang H, Pilkington J, Corbett B Greater Social Competence Is Associated With Higher Interpersonal Neural Synchrony in Adolescents With Autism Front. Hum. Neurosci., 06 January 2022 Sec. Cognitive Neuroscience Volume 15 – 2021
Gonzalez H, Narasimhan S, Goodale S, Johnson G, Doss D, Paulo D, Morgan V, Chang C, Englot D Arousal and salience network connectivity alterations in surgical temporal lobe epilepsy JNS 1 – 11 July 2022
Bolt, T., Nomi, J.S., Bzdok, D. Salsa J, Chang C, Ye BT, Uddin L, Keilholz S. A parsimonious description of global functional brain organization in three spatiotemporal patterns. Nat Neurosci 25, 1093–1103 (2022).
Munhall, C.C., Noble, J.H., Dawant, B., Labadie R Cochlear Implant Translocation: Diagnosis, Prevention, and Clinical Implications. Curr Otorhinolaryngol Rep 10, 337–342 (2022).
Bratu E, Sunderhaus L, Berg K, Dwyer R, Labadie R, Gifford R, Noble J Activation region overlap visualization for image-guided cochlear implant programming Biomedical Physics & Engineering Express, Vol 1, No 1, Nov 2022
Nimmagadda, N., Ferguson, J.M., Kavoussi, N.L. Pitt B, Barth E, Granna J, Webster R III, Herrell S III. Patient-specific, touch-based registration during robotic, image-guided partial nephrectomy. World J Urol 40, 671–677 (2022)
Ringel MJ, Richey WL, Heiselman JS, Luo M, Meszoely IM, Miga MI. Supine magnetic resonance image registration for breast surgery: insights on material mechanics. J Med Imaging (Bellingham). 2022 Nov;9(6):065001
Dietz N, Alhourani A, Wylie SA, McDonnell JL, Phibbs FT, Dawant BM, Rodriguez WJ, Bradley EB, Neimat JS, van Wouwe NC Effects of deep brain stimulation target on the activation and suppression of action impulses. Clin Neurophysiol. 2022 Dec;144:50-58. doi: 10.1016/j.clinph.2022.09.012
Parks K, Liu X, Reasat T, Khera Z, Baker LX, Chen H, Dawant BM, Saknite I, Tkaczyk ER Non-Expert Markings of Active Chronic Graft-Versus-Host Disease Photographs: Optimal Metrics of Training Effects. J Digit Imaging. 2022 Nov 7. doi: 10.1007/s10278-022-00730-8.
Gifford RH, Sunderhaus LW, Dawant BM, Labadie RF, Noble JH Cochlear implant spectral bandwidth for optimizing electric and acoustic stimulation (EAS). Hear Res. 2022 Dec;426:108584. doi: 10.1016/j.heares.2022.108584.
Berg KA, Noble JH, Dawant BM, Dwyer RT, Labadie RF, Gifford RH Speech recognition with cochlear implants as a function of the number of channels: Effects of electrode placement. J Acoust Soc Am. 2020 May;147(5):3646.
Dietz N, Alhourani A, Wylie S, McDonnell J, Phibbs F, Dawant BM, Rodriguez W, E Bradley, Neimat J, van Wouwe N Effects of deep brain stimulation target on the activation and suppression of action impulses Clinical Neurophysiology Volume 144, December 2022, Pages 50-58
Parks K, Liu X, Reasat T, Khera Z, Baker L, Chen H, Dawant BM, Saknite I, Tkaczyk E Non-Expert Markings of Active Chronic Graft-Versus-Host Disease Photographs: Optimal Metrics of Training Effects Journal of Digital Imaging, November 2022
Paulo, D; Narasimhan, S; Gonzalez, H Rodriguez, W; Li, R; Konrad, P; Neimat, J; Shah, H; Bick, S; D'Haese, P; Dawant, B; Englot, D Optimization of DBS Electrode Position With Multisite Microelectrode Recordings, Macrostimulation, and Atlas-Based Prediction Maps Visualized in 3D Neurosurgery 68(Supplement_1):p 62-63, April 2022
Tang E, El-Haddad M, Patel S, Tao YK Automated instrument-tracking for 4D video-rate imaging of ophthalmic surgical maneuvers Biomedical Optics Express (2022) Vol.13, Issue 3, pp. 1471-1484
Rostami M, Kolouri S, Murez Z, Owechko Y, Eaton E, Kim K, Zero-shot image classification using coupled dictionary embedding Machine Learning with Applications, Volume 8, 2022, 100278
Kudithipudi, D., Aguilar-Simon, M., Babb, J. Bazhenov M, Blackston D, Bongard J, Brna A, Raja S, Cheney N, Clune J, Daram A, Fusi S, Helfer P, Kay L, Ketz N, Kira Zsolt, Kolouri S, Krichmar J, Kriegman S, Levin M, Madireddy S, Manicka S, Marjaninejad A, McNaughton B, Miikkulainen R, Navratilova Z, Pandit T, Parker A, Pilly P, Risi S, Sejnowski T, Soltoggio A, Soures N, Tolias A, Urbina-Melendez D, Valero-Cuevas F, van de Ven G, Vogelstein J, Wang F, Weiss R, Yanguas-Gil A, Zou X & Seigelmann H Biological underpinnings for lifelong learning machines Nat Mach Intell 4, 196–210 (2022)
Perkins E, Labadie R, Mallery M, Bennett M, Noble J, Haynes, Gifford R The Relation of Cochlear Implant Electrode Array Type and Position on Continued Hearing Preservation Otol Neurotol. 2022 Jul 1;43(6)
Morrel W, Manzoor N, Dawant B, Noble J, Labadie R Intraoperative Correction of Cochlear Implant Electrode Translocation Audiol Neurotol 2022;27(2):104-108
Berg K, Noble J, Dawant B, Dwyer R. Labadie R, Gifford R Speech recognition as a function of the number of channels for Mid-Scala electrode array recipients The Journal of the Acoustical Society of America 152, 67 (July 2022)
Iraji A, Faghiri A, Fu Z, Kochunov P, Adhikari BM, Belger A, Ford JM, McEwen S, Mathalon DH, Pearlson GD, Potkin SG, Preda A, Turner JA, Van Erp TGM, Chang C, Calhoun VD Moving beyond the ‘CAP’ of the Iceberg: Intrinsic connectivity networks in fMRI are continuously engaging and overlapping NeuroImage, Volume 251, 2022, 119013
Chou Y, Chang C, Remedios S, Butman J, Chan L, Pham D Automated Classifcation of Resting-State fMRI ICA Components Using a Deep Siamese Network Front Neurosci 2022; 16:768634
Morgan V, Sainburg L, Johnson G, Janson A, Levine K, Rogers B, Chang C, Englot D, Presurgical temporal lobe epilepsy connectome fingerprint for seizure outcome prediction Brain Communications, Volume 4, Issue 3, 2022
Sainburg K, Little A, Johnson G, Janson, A, Levine K , González H, Rogers B, Chang C, Englot D, Morgan V Characterization of resting functional MRI activity alterations across epileptic foci and networks Cerebral Cortex, 2022, 00, 1-14
Rico-Jimenez J, Hu D, Tang E, Oguz I, Tao YK Real-time OCT image denoising using a self-fusion neural network Biomedical Optics Express Vol. 13, Issue 3, pp. 1398-1409 (2022)
Moore E, Khan O, Shashikumar N, Pechman K, Liu D, Bell S, Nair S, Terry J, Gifford K, Anderson A, Landman BA, Blennow K, Zetterberg H, Hohman T, Carr J, Jefferson A Axonal Injury Partially Mediates Associations Between Increased Left Ventricular Mass Index and White Matter Damage Stroke Vol 53, No 3 March 2022
Liu Y, Huo Y, Dewey B, Wei Y, Lyu I, Landman BA Generalizing deep learning brain segmentation for skull removal and intracranial measurements Magnetic Resonance Imaging Volume 88, 2022, Pages 44-52
Kanakaraj P, Ramadass K, Bao S, Basfor M, Jones L, Lee H, Xu K, Schilling K, Carr J, Terrry J, Huo Y, Sandler K, Newton A, Landman BA. Workflow Integration of Research AI Tools into a Hospital Radiology Rapid Prototyping Environment. J Digit Imaging (2022).
Schilling K, Archer D, Yeh FC, Rheault F, Cai L, Hansen C, Yang Q, Ramdass K, Shafer A, Resnick S, Pechman K, Gifford K, Hohman T, Jefferson A, Anderson A, Kang H, Landman BA. Aging and white matter microstructure and macrostructure: a longitudinal multi-site diffusion MRI study of 1218 participants. Brain Struct Funct 227, 2111–2125 (2022).
Rheault F, Schilling K, Obaid S, Begnoche J, Cutting L, Descoteaux M, Landman BA, Petit L The influence of regions of interest on tractography virtual dissection protocols: general principles to learn and to follow Brain Struct Funct 227, 2191–2207 (2022)
Rheault F, Bayrak R, Wang X, Schilling K, Greer J, Hansen C, Kerley C, Ramadass K, Remedios L , Blaber J, Williams O, Beason-Held L, Resnick S, Rogers B, Landman BA, TractEM: Evaluation of protocols for deterministic tractography white matter atlas Magnetic Resonance Imaging, Volume 85, 2022, Pages 44-56
Begnoche J, Schilling K, Boyd B, Cai L, Taylor W, Landman BA, EPI susceptibility correction introduces significant differences far from local areas of high distortion Magnetic Resonance Imaging, Volume 92, 2022, Pages 1-9
Hansen C, Schilling K, Rheault F, Resnick S, Shafer A, Beason-Held L, Landman BA, Contrastive semi-supervised harmonization of single-shell to multi-shell diffusion MRI Magnetic Resonance Imaging, June 2022
Rheault F, Schilling K, Valcourt-Caron A, Theberge A, Poirier C, Grenier G, Guberman G, Begnoche J, Legarreta J, Cai L, Roy M, Edde M, Caceres M, Ocampo-Pineda M, Al-Sharif N, Karan P, Bontempi P, Obaid S, Bosticardo S, Schiavi S, Sairanen V, Daducci A, Cutting L, Petit L, Descoteaux M, Landman B Tractostorm 2: Optimizing tractography dissection reproducibility with segmentation protocol dissemination Human Brain Mapping May 2022 Volume 43 Issue 7 2134-2147
Maffei C, Girard G, Schilling K, Aydogan D, Adluru N, Zhylka A, Wu Y, Mancini M, Hamamci A, Sarica A, Teillac A, Baete S, Karimi D, Yeh FC, Yildiz M, Gholipour A, Bihan-Poudec Y, Hiba B, Quattrone A, Quattrone A, Boshkovski T, Stikov N, Yap PT, Luca A, Pluim J, Leemans A, Prabhakaran V, Bendlin B, Alexander A, Landman AB, Canales-Rodríguez E, Barakovic M, JRafael-Patino J, Yu T, Rensonnet G, Schiavi S, Daducci A, Pizzolato M, Fischi-Gomez E, Thiran JP, Dai G, Grisot G, Lazovski N, Puch S, Ramos M, Rodrigues P, Prčkovska V, Jones R, Lehman J, Haber S, Yendiki A, Insights from the IronTract challenge: Optimal methods for mapping brain pathways from multi-shell diffusion MRI NeuroImage, Volume 257, August 2022
Schilling K, Tax C, RheaultF, Landman B, Anderson A, Descoteaux, Petit L Prevalence of white matter pathways coming into a single white matter voxel orientation: The bottleneck issue in tractography Human Brain Mapping March 2022 Volume 43, Issue 4, 1196-1213
Freeman M, Gafford J. Fichera L, Noble J, Webster R. III Labadie R Transeustachian Middle Ear Endoscopy Using a Steerable Distal-Camera Tipped Endoscope Otology & Neurotology: February 2022 - Volume 43 - Issue 2 - p 206-211
Servin F, Collins J, Heiselman J, Frederick-Dyer K, Planz V, Geevarghese S, Brown, D, Miga, I Fat Quantification Imaging and Biophysical Modeling for Patient-Specific Forecasting of Microwave Ablation Therapy Frontiers in Physiology Feb 2022 Vol 12 Article 820251
McNeil A, Parks K, Liu X, Saknite I, Chen F, Reasat T, Cronin A, Wheless, L, Dawant BM, Tkaczyk E Artificial intelligence recognition of cutaneous chronic graft-versus-host disease by a deep learning neural network Br J Haematol 2022 Jun;197(6):e69-e72.
2021
Gafford J, Freeman M, Fichera L, Noble J, Labadie R, Webster RJ III Eyes in Ears: A Miniature Steerable Digital Endoscope for Trans-Nasal Diagnosis of Middle Ear Disease Ann Biomed Eng 2021 Jan;49(1):219-232
Martin CG, He BJ, Chang C. State-related neural influences on fMRI connectivity estimation Neuroimage. 2021 Dec 1;244:118590
Bao S, Tang Y, Lee HH, Gao R, Chiron S, Lyu I, Coburn LA, Wilson KT, Roland JT, Landman BA, Huo Y. Random Multi-Channel Image Synthesis for Multiplexed Immunofluorescence Imaging Proc Mach Learn Res. 2021 Sep;156:36-46
Damon BM, Ding Z, Hooijmans MT, Anderson AW, Zhou X, Coolbaugh CL, George MK, Landman BA. A MATLAB toolbox for muscle diffusion-tensor MRI tractography J Biomech. 2021 Jul 19;124:110540. doi: 10.1016/j.jbiomech.2021.110540. Epub 2021 Jun
Kammer MN, Lakhani DA, Balar AB, Antic SL, Kussrow AK, Webster RL, Mahapatra S, Barad U, Shah C, Atwater T, Diergaarde B, Qian J, Kaizer A, New M, Hirsch E, Feser WJ, Strong J, Rioth M, Miller YE, Balagurunathan Y, Rowe DJ, Helmey S, Chen SC, Bauza J, Deppen SA, Sandler K, Maldonado F, Spira A, Billatos E, Schabath MB, Gillies RJ, Wilson DO, Walker RC, Landman B, Chen H, Grogan EL, Barón AE, Bornhop DJ, Massion PP. Integrated Biomarkers for the Management of Indeterminate Pulmonary Nodules Am J Respir Crit Care Med. 2021 Dec 1;204(11):1306-1316.
Liu X, Parks K, Saknite I, Reasat T, Cronin AD, Wheless LE, Dawant BM, Tkaczyk ER. Baseline Photos and Confident Annotation Improve Automated Detection of Cutaneous Graft-Versus-Host Disease Clin Hematol Int. 2021 Jul 15;3(3):108-115.
Robb WH, Khan OA, Ahmed HA, Li J, Moore EE, Cambronero FE, Pechman KR, Liu D, Gifford KA, Landman BA, Donahue MJ, Hohman TJ, Jefferson AL. Lower cerebral oxygen utilization is associated with Alzheimer's disease-related neurodegeneration and poorer cognitive performance among apolipoprotein E ε4 carriers J Cereb Blood Flow Metab. 2022 Apr;42(4):642-655. doi: 10.1177/0271678X211056393. Epub 2021 Nov 7.
Chen Y, Wang L, Galloway K, Godage I, Simaan N, Barth E Model-Based Kinematics and Contact Detection of Soft Robots Soft Robot 2021 Jun;8(3):298-309
Dupont PE, Nelson BJ, Goldfarb M, Hannaford B, Menciassi A, O'Malley MK, Simaan N, Valdastri P, Yang GZ. A decade retrospective of medical robotics research from 2010 to 2020 Sci Robot. 2021 Nov 10;6(60):eabi8017
Pearlman S, Tang E, Tao YK, Haselton F Controlling Droplet Marangoni Flows to Improve Microscopy-Based TB Diagnoisis Diasnostics (Basel). 2021 Nov 21;11(110:2155
Tang E, Tao YK Modeling and optimization of galvanometric point-scanning temporal dynamics Biomed Opt Express. 2021 Oct 5;12(11):6570-6716
Ringel M, Tang E, Tao YK Advances in Multimoda imaging in ophthalmology Ther Adv Ophthalmol. 2021 Mar 19
Alvarez P, Rouze S, Miga M, Payan Y, Dillenseger JL, Chabanas M A hybrid, image-based and biomechanics-based registration approach to markerless intraoperative nodule localization during video-assisted thoracoscopic surgery Med Image Anal 2021 Apr;69:101983
Mamunes AP, Campisano F, Martin J, Scaglioni B, Mazomenos E, Valdastri P, Obstein KL. Magnetic flexible endoscope for colonoscopy: an initial learning curve analysis. Endosc Int Open. 2021 Feb;9(2):E171-E180
Yang Y, Tang Y, Gao R, Bao S, Huo Y, McKenna MT, Savona MR, Abramson RG, Landman BA. Validation and estimation of spleen volume via computer-assisted segmentation on clinically acquired CT scans. J Med Imaging (Bellingham). 2021 Jan;8(1):014004
Salas JA, Bayrak RG, Huo Y, Chang C. Reconstruction of respiratory variation signals from fMRI data. Neuroimage. 2021 Jan 15;225:117459
Zoltowski A, Lyu I, Failla M, Mash L, Dunham K, Feldman J, Woynaroski T, Wallace M, Barquero L, Nguyen T, Cutting L, Kang H, Landman B, Cascio C Cortical Morphology in Autism: Findings from a Cortical Shape-Adaptive Approach to Local Gyrification Indexing Cerebral Cortex bhab151, June 2021
Schilling K, Tax C, Rheault F, Hansen C, Yang Q, Yeh FC, Cai L, Anderson A, Landman, B Fiber tractography bundle segmentation depends on scanner effects, vendor effects, acquisition resolution, diffusion sampling scheme, diffusion sensitization, and bundle segmentation workflow NeuroImage Vol 242 Nov 2021
Cai L, Yang Q, Hansen C, Nath V, Ramadass K, Johnson G, Conrad B, Boyd B, Begnoche J, Beason-Held L, Shafer A, Resnick S, Taylor W, Price G, Morgan V, Rogers B, Schilling K, Landman B PreQual: An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images Magnetic Resonance in Medicine Vol 86, Issue 1 July 2021
Kavoussi N, Pitt B, Ferguson J, Granna J, Remirez A, Nimmagadda N, Melnyk R Ghazi A, Barth E, Webster R, Herrell SD Accuracy of Touch-Based Registration During Robotic Image-Guided Partial Nephrectomy Before and After Tumor Resection in Validated Phantoms Journal of Endourology.Mar 2021.362-368.
Nimmagadda, N., Ferguson, J.M., Kavoussi, N.L, Pitt B, Granna J, Webster R, Herrell SD Patient-specific, touch-based registration during robotic, image-guided partial nephrectomy. World J Urol (2021).
Bruns T, Remirez A, Emerson M, Lathrop R, Mahoney A, Gilbert H, Liu C, Russell P, Labadie R, Weaver K, Webster R A modular, multi-arm concentric tube robot system with application to transnasal surgery for orbital tumors Int Journal of Robotics Research Vol 40, Issue 2-3, 2021
Dohm A, Nickles T, Miller C, Bowers H, Miga M, Attia A, Chan M, Weis J Clinical assessment of a biophysical model for distinguishing tumor progression from radiation necrosis Med Phys 2021 Jul;48(7):3852-3859
Miga M, Labadie R A Novel Clinically Immersive Pre-doctoral Training Program for Engineering in Surgery and Intervention: Initial Realization and Preliminary Results Biomed Eng Education 1, 259–276 (2021)
Richey W, Heiselman J, Luo M, Meszoely M, Miga M Impact of deformation on a supine-positioned image-guided breast surgery approach Int J CARS (2021).
Kavoussi N, Pitt B, Ferguson J, Granna J, Remirez A, Nimmagadda N, Melnyk R, Ghazi A, Barth E, Webster R, and Herrell SD Before and After Tumor Resection in Validated Phantoms Journal of Endourology.Mar 2021.362-368.
Berg K, Noble J, Dawant B, Dwyer R, Labadie R, Gifford R Speech recognition as a function of the number of channels for an array with large inter-electrode distances J Acoust Soc Am. 2021 Apr;149(4):2752
Schilling K, Rheault F, Petit L, Landman B, Descoteaux M Tractography dissection variability: What happens when 42 groups dissect 14 white matter bundles on the same dataset? NeuroImage Volume 243, November 2021, 118502
Wills K, González H, Johnson G, Haas K, Morgan V, Narasimhan S, EnglotD D People with mesial temporal lobe epilepsy have altered thalamo-occipital brain networks Epilepsy & Behavior, Feb 2021 Volume 115, 107645
Whitten A, Jacobs M, Englot D, Rogers B, Levine K, González H, Morgan V Resting-state hippocampal networks related to language processing reveal unique patterns in temporal lobe epilepsy Epilepsy & Behavior April 2021 Volume 117, 107834
Ahronovich, E.Z., Simaan, N. & Joos, K.M. A Review of Robotic and OCT-Aided Systems for Vitreoretinal Surgery. Adv Ther (2021) 38, 2114–2129
Salas J, Bayrak R, Huo Y, Chang C Reconstruction of respiratory variation signals from fMRI data NeuroImage January 2021 Volume 225, 117459
González H, Narasimhan S , Johnson G, Wills K, Haas K, Konrad P, Chang C, Morgan V, Rubinov M, Englot D Role of the Nucleus Basalis as a Key Network Node in Temporal Lobe Epilepsy Neurology Mar 2021, 96 (9) e1334-e1346
Zhang S, Spoletini L, Gold B, Morgan V, Rogers B, Chang C, Interindividual Signatures of fMRI Temporal Fluctuations Cerebral Cortex, 2021;, bhab099
Goodale S, Ahmed S, Zhao C, de Zwart J, Özbay P, Picchioni D, Duyn J, Englot D, Morgan V, Chang C fMRI-based detection of alertness predicts behavioral response variability eLife2021;10:e62376
Tang Y, Gao R, Lee H, Han S, Chen Y, Gao D, Nath V, Bermudez C, Savona M, Abramson R, Bao S, Lyu I, Huo Y, Landman BA High-resolution 3D abdominal segmentation with random patch network fusion Medical Image Analysis April 2021 Volume 69, 101894
Lyu I, Bao S, Hao L, Yao J, Miller J, Voorhies W, Taylor W, Bunge S, Weiner K, Landman BA Labeling lateral prefrontal sulci using spherical data augmentation and context-aware training NeuroImage April 2021 Volume 229, 117758
Tang Y, Gao R, Lee H, Chen Y, Gao D, Bermudez C, Bao S, Huo Y, Savoie B, Landman BA Phase identification for dynamic CT enhancements with generative adversarial network Medial Physics March 2021 Vol 48, Issue 3, pges 1276-1285
Morgan V, Johnson G, Cai L, Landman BA , Schilling K, Englot D, Rogers B, Chang C MRI network progression in mesial temporal lobe epilepsy related to healthy brain architecture Network Neuroscience (May 2021) 5 (2): 434–450.
Shafer A, Beason-Held L, An Y, Williams O, Huo Y, Landman BA, Caffo B, Resnick S Default mode network connectivity and cognition in the aging brain: the effects of age, sex, and APOE genotype. Neurobiology of Aging August 2021 Volume 104, Pages 10-23
Zhao M, Jha A, Liu Q, Millis B, Mahadevan-Jansen A, Lu L, Landman BA, Tyska M, Huo Y Faster Mean-shift: GPU-accelerated clustering for cosine embedding-based cell segmentation and tracking Medical Image Analysis July 2021, Volume 71102048
Plassard A, Bao S, McHugo M, Beason-Held L, Blackford J, Heckers S, Landman BA Automated, open-source segmentation of the Hippocampus and amygdala with the open Vanderbilt archive of the temporal lobe Magnetic Resonance Imaging Available online 24 April 2021
K Riojas , E Tran , M Freeman , J Noble , RJ Webster, R Labadie Clinical Translation of an Insertion Tool for Minimally Invasive Cochlear Implant Surgery J. Med. Devices. Sep 2021, 15(3): 031001 (9 pages)
Campisano F, Caló F, Remirez A, Chandler J, Obstein K, Webster RJ, Valdastri P Closed-loop control of soft continuum manipulators under tip follower actuation Sage Journals June 2021 Volume: 40 issue: 6-7, page(s): 923-938
Hendricks C, Cavilla M, Usevitch D, Bruns T, Riojas K, Leon L, Webster RJ, Warren F, Abbott J Magnetic Steering of Robotically Inserted Lateral-wall Cochlear-implant Electrode Arrays Reduces Forces on the Basilar Membrane In Vitro Otology & Neurotology: April 14, 2021 - Volume Publish Ahead of Print - Issue -
AlvarezP, Rouzé S, Miga MI, Payan Y, Dillenseger JD, Chabanas. M A hybrid, image-based and biomechanics-based registration approach to markerless intraoperative nodule localization during video-assisted thoracoscopic surgery Medical Image Analysis Volume 69, April 2021, 101983
Luo M, Narasimhan S, Larson P, Martin A, Konrad P, Miga MI Impact of brain shift on neural pathways in deep brain stimulation: a preliminary analysis via multi-physics finite element models April 2021 Journal of Neural Engineering, Volume 18, Number 5
Labadie R, Riojas K, Von Wahlde K, Mitchell J, Bruns T, Webster III R, Dawant BM, Fitzpatrick JM, Noble J, Clinical Implementation of Second-generation Minimally Invasive Image-guided Cochlear Implantation Surgery Otology & Neurotology: January 28, 2021 - Volume Publish Ahead of Print - Issue -
Gifford R, Camarata S, Labadie R, Dawant BM, Sunderhaus L, Byram B, Emily EM, Noble J Image-guided Cochlear Implant Programming for Pediatric CI Recipients The Hearing Journal: December 2020 - Volume 73 - Issue 12 - p 38,39
John K, Wylie S, Dawant BM, Rodriguez WJ, Phibbs F, Bradley E, Neimat J, van Wouwe N Deep brain stimulation effects on verbal fluency dissociated by target and active contact location Annals of Clinical and Translational Neurology March 2021, Vol 8, Issue 3, Pgs 613-622
Hett K, Lyu I, Trujillo P, Lopez A, Aumann M, Larson K, Hedera P, Dawant BM, Landman BA, Claassen D, Oguz I Anatomical texture patterns identify cerebellar distinctions between essential tremor and Parkinson's disease Human Brain Mapping June 2021 Volume42, Issue8 Pages 2322-2331
Wouwe N, Neimat J , van den Wildenberg W, Hughes S, Lopez A , Phibbs F, Schall H, Rodriguez WJ, Bradley E, Dawant BM, Wylie S. Subthalamic Nucleus Subregion Stimulation Modulates Inhibitory Control. Cereb Cortex Commun. 2020;1(1):tgaa083. doi: 10.1093/texcom/tgaa083. Epub 2020 Nov 4
Morrel W, Manzoor N, Dawant BM, Noble J, Labadie R Intraoperative Correction of Cochlear Implant Electrode Translocation Audiol Neurotol April 2021 DOI: 10.1159/000515684
Hett K, Ta VT, Oguz I, Manjón JV, Coupé P; Multi-scale graph-based grading for Alzheimer's disease prediction. Med Image Anal. 2021 Jan;67:101850
2020
Zhang H, Bakshi R, Bagnato F, Oguz I. Robust Multiple Sclerosis Lesion Inpainting with Edge Prior Mach Learn Med Imaging. 2020 Oct;12436:120-129
Hu D., Malone J.D., Atay Y., Tao Y.K., Oguz I. (2020) Retinal OCT Denoising with Pseudo-Multimodal Fusion Network Ophthalmic Medical Image Analysis. Nov 2020 OMIA 2020.
Ferguson J, Pitt B, Kuntz A, Granna J, Kavoussi N, Nimmagadda N, Barth E, Herrell III S, Webster III RJ Comparing the accuracy of the da Vinci Xi and da Vinci Si for image guidance and automation December 2020 Volume16, Issue6 Pages 1-10
Remirez A, Rox M, Bruns T, Russell P, Webster RJ A Teleoperated Surgical Robot System November 2020 Neurosurgical Robotics pp 49-61
Tang Y, Gao R, Chen Y, Gao D, Savona MR, Abramson RG, Bao S, Huo Y, Landman BA. Learning from dispersed manual annotations with an optimized data weighting policy. J Med Imaging (Bellingham). 2020 Jul;7(4):044002.
Ning L, Bonet-Carne E, Grussu F, Sepehrband F, Kaden E, Veraart J, Blumberg SB, Khoo CS, Palombo M, Kokkinos I, Alexander DC, Coll-Font J, Scherrer B, Warfield SK, Karayumak SC, Rathi Y, Koppers S, Weninger L, Ebert J, Merhof D, Moyer D, Pietsch M, Christiaens D, Gomes Teixeira RA, Tournier JD, Schilling KG, Huo Y, Nath V, Hansen C, Blaber J, Landman BA, Zhylka A, Pluim JPW, Parker G, Rudrapatna U, Evans J, Charron C, Jones DK, Tax CMW. Cross-scanner and cross-protocol multi-shell diffusion MRI data harmonization: Algorithms and results. Neuroimage. 2020 Nov 1;221:117128.
González-Villà S, Oliver A, Huo Y, Lladó X, Landman BA. A fully automated pipeline for brain structure segmentation in multiple sclerosis. Neuroimage Clin. 2020;27:102306
Yachimski P, Landewee CA, Campisano F, Valdastri P, Obstein KL. The waterjet necrosectomy device for endoscopic management of pancreatic necrosis: design, development, and preclinical testing (with videos). Gastrointest Endosc. 2020 Sep;92(3):770-775
Chen Y, Wang L, Galloway K, Godage I, Simaan N, Barth E Modal-Based Kinematics and Contact Detection of Soft Robots Soft Robot 2020 Jul 13. doi: 10.1089/soro.2019.0095
Berg KA, Noble JH, Dawant BM, Dwyer RT, Labadie RF, Gifford RH. Speech recognition with cochlear implants as a function of the number of channels: Effects of electrode placement. J Acoust Soc Am. 2020 May;147(5):3646
Gafford J, Freeman M, Fichera L, Noble J, Labadie R, Webster RJ 3rd. Eyes in Ears: A Miniature Steerable Digital Endoscope for Trans-Nasal Diagnosis of Middle Ear Disease. Ann Biomed Eng. 2020 May 26:10.1007/s10439-020-02518-9
Khan MMR, Labadie RF, Noble JH. Preoperative prediction of angular insertion depth of lateral wall cochlear implant electrode arrays. J Med Imaging (Bellingham). 2020 May;7(3):031504
Morrel WG, Holder JT, Dawant BM, Noble JH, Labadie RF. Effect of Scala Tympani Height on Insertion Depth of Straight Cochlear Implant Electrodes. Otolaryngol Head Neck Surg. 2020 May;162(5):718-724
Carton FX, Chabanas M, Le Lann F, Noble JH. Automatic segmentation of brain tumor resections in intraoperative ultrasound images using U-Net. J Med Imaging (Bellingham). 2020 May;7(3):031503
Banalagay RA, Labadie RF, Chakravorti S, Noble JH. Insertion Depth for Optimized Positioning of Precurved Cochlear Implant Electrodes. Otol Neurotol. 2020 Sep;41(8):1066-1071
Salas JA, Bayrak RG, Huo Y, Chang C. Reconstruction of respiratory variation signals from fMRI data. Neuroimage. 2020 Oct 28;225:117459.
Simony E, Chang C. Analysis of stimulus-induced brain dynamics during naturalistic paradigms. Neuroimage. 2020 Aug 1;216:116461.
Karve PM, Duddu R, Tierney J, Dei K, Hsi R, Byram B On the Effects of Constitutive Properties and Roughness of a Hard Inclusion in Soft Tissue on B-mode Images. Ultrason Imaging. 2020 May;42(3):159-17
Failla MD, Schwartz KL, Chaganti S, Cutting LE, Landman BA, Cascio CJ. Using phecode analysis to characterize co-occurring medical conditions in autism spectrum disorder. Autism. 2020 Jul 14:1362361320934561.
Nath V, Schilling KG, Parvathaneni P, Huo Y, Blaber JA, Hainline AE, Barakovic M, Romascano D, Rafael-Patino J, Frigo M, Girard G, Thiran JP, Daducci A, Rowe M, Rodrigues P, Prčkovska V, Aydogan DB, Sun W, Shi Y, Parker WA, Ould Ismail AA, Verma R, Cabeen RP, Toga AW, Newton AT, Wasserthal J, Neher P, Maier-Hein K, Savini G, Palesi F, Kaden E, Wu Y, He J, Feng Y, Paquette M, Rheault F, Sidhu J, Lebel C, Leemans A, Descoteaux M, Dyrby TB, Kang H, Landman BA. Tractography reproducibility challenge with empirical data (TraCED): The 2017 ISMRM diffusion study group challenge. J Magn Reson Imaging. 2020 Jan;51(1):234-249
Gao R, Tang Y, Xu K, Huo Y, Bao S, Antic SL, Epstein ES, Deppen S, Paulson AB, Sandler KL, Massion PP, Landman BA. Time-distanced gates in long short-term memory networks . Med Image Anal. 2020 Oct;65:101785.
Morrel WG, Riojas KE, Webster RJ 3rd, Noble JH, Labadie RF Custom mastoid-fitting templates to improve cochlear implant electrode insertion trajectory. Int J Comput Assist Radiol Surg. 2020 Oct;15(10):1713-1718.
Harvey L, Hendrick R, Dillon N, Blum E, Branscombe L, Webster S, Webster RJ, Anderson T. A Novel Robotic Endoscopic Device Used for Operative Hysteroscopy. J Minim Invasive Gynecol. 2020 Nov-Dec;27(7):1631-1635
Narasimhan S, Weis JA, Luo M, Simpson AL, Thompson RC, Miga MI. Accounting for intraoperative brain shift ascribable to cavity collapse during intracranial tumor resection. J Med Imaging (Bellingham). 2020 May;7(3):031506
Simpson A, Miga M. Special Section Guest Editorial: Interventional and Surgical Data Science for Data-Driven Patient Outcomes. J Med Imaging (Bellingham). 2020 May;7(3):031501.
Lopez AM, Trujillo P, Hernandez AB, Lin YC, Kang H, Landman BA, Englot DJ, Dawant BM, Konrad PE, Claassen DO. Structural Correlates of the Sensorimotor Cerebellum in Parkinson's Disease and Essential Tremor. Mov Disord. 2020 Jul;35(7):1181-1188.
Goodale SE, González HFJ, Johnson GW, Gupta K, Rodriguez WJ, Shults R, Rogers BP, Rolston JD, Dawant BM, Morgan VL, Englot DJ. Resting-State SEEG May Help Localize Epileptogenic Brain Regions. Neurosurgery. 2020 Jun 1;86(6):792-801.
Labadie RF, Schefano AD, Holder JT, Dwyer RT, Rivas A, O'Malley MR, Noble JH, Dawant BM. Use of intraoperative CT scanning for quality control assessment of cochlear implant electrode array placement. Acta Otolaryngol. 2020 Mar;140(3):206-211.
Berg KA, Noble JH, Dawant BM, Dwyer RT, Labadie RF, Gifford RH. Speech recognition with cochlear implants as a function of the number of channels: Effects of electrode placement. J Acoust Soc Am. 2020 May;147(5):3646.
Narasimhan S, Kundassery K, Gupta K, Johnson G, Wills K, Goodale S, Haas K, Rolston J, Naftel R, Morgan V, Dawant B, González H, Englot D Seizure‐onset regions demonstrate high inward directed connectivity during resting‐state: An SEEG study in focal epilepsy Epilepsia. 2020 Nov;61(11):2534-2544
Gafford JB, Webster S, Dillon N, Blum E, Hendrick R, Maldonado F, Gillaspie EA, Rickman OB, Herrell SD, Webster RJ 3rd. A concentric tube robot system for rigid bronchoscopy: a feasibility study on central airway obstruction removal Ann Biomed Eng. 2020 Jan;48(1):181-19
Quah K, Poorman ME, Allen SP, Grissom WA. Simultaneous multislice MRI thermometry with a single coil using incoherent blipped-controlled aliasing. Magn Reson Med. 2020 Feb;83(2):479-491.
Morgan VL, Chang C, Englot DJ, Rogers BP. Temporal lobe epilepsy alters spatio-temporal dynamics of the hippocampal functional network. Neuroimage Clin. 2020 Mar 25;26:102254.
Carton FX, Chabanas M, Le Lann F, Noble JH. Automatic segmentation of brain tumor resections in intraoperative ultrasound images using U-Net. J Med Imaging (Bellingham). 2020 May;7(3):031503. doi: 10.1117/1.JMI.7.3.031503. Epub 2020 Feb 18.
Li Y, Zhang H, Bermudez C, Chen Y, Landman BA, Vorobeychik Y. Anatomical context protects deep learning from adversarial perturbations in medical imaging Neurocomputing Feb 2020 379: 370-378
González HFJ, Goodale SE, Jacobs ML, Haas KF, Landman BA, Morgan VL, Englot DJ. Brainstem Functional Connectivity Disturbances in Epilepsy may Recover After Successful Surgery. Neurosurgery. 2020 Mar 1;86(3):417-428.
Krylova M, Alizadeh S, Izyurov I,Teckentrup V, Chang C, van der Meer JN, Erb M, Kroemer N, Koenig T, Walter M, Jamalabadi H. Evidence for modulation of EEG microstate sequence by vigilance level Feb 2020 bioRxiv (This article is a preprint and has not been certified by peer review)
Chen JE, Lewis LD, Chang C, Tian Q, Fultz NE, Ohringer NA, Rosen BR, Polimeni JR. Resting-state “physiological networks” Neuroimage. 2020 Mar 5;213:116707. doi: 10.1016/j.neuroimage.2020.116707. [Epub ahead of print]
Duyn JH, Ozbay PS, Chang C, Picchioni D. Physiological changes in sleep that affect fMRI inference Current Opinion in Behavioral Sciences. Jun 2020; (33) 42-50
Riqiang Gao, Yuankai Huo, Shunxing Bao, Yucheng Tang, Sanja L Antic, Emily S Epstein, Steve Deppen, Alexis B Paulson, Kim L Sandler, Pierre P Massion, Bennett A Landman Multi-path xD recurrent neural networks for collaborative image classification Neurocomputing Feb 2020; In Press, Corrected Proof
Remedios SW, Roy S, Bermudez C, Patel MB, Butman JA, Landman BA, Pham DL. Distributed deep learning across multisite datasets for generalized CT hemorrhage segmentation. Med Phys. 2020 Jan;47(1):89-98. doi: 10.1002/mp.13880. Epub 2019 Nov 19.
Tetreault AM, Phan T, Orlando D, Lyu I, Kang H, Landman B, Darby RR. Network localization of clinical, cognitive, and neuropsychiatric symptoms in Alzheimer's disease. Brain. 2020 Mar 16. pii: awaa058. doi: 10.1093/brain/awaa058. [Epub ahead of print]
Sheffield JM, Huang AS, Rogers BP, Giraldo-Chica M, Landman BA, Blackford JU, Heckers S, Woodward ND. Thalamocortical Anatomical Connectivity in Schizophrenia and Psychotic Bipolar Disorder. Schizophr Bull. 2020 Mar 27. pii: sbaa022. doi: 10.1093/schbul/sbaa022. [Epub ahead of print]
Englot DJ, Morgan VL, Chang C. Impaired vigilance networks in temporal lobe epilepsy: Mechanisms and clinical implications. Epilepsia. 2020 Feb;61(2):189-202. doi: 10.1111/epi.16423. Epub 2020 Jan 4. Review.
Oguz I, Yushkevich N, Pouch A, Oguz BU, Wang J, Parameshwaran S, Gee J, Yushkevich PA, Schwartz N. Minimally interactive placenta segmentation from three-dimensional ultrasound images. J Med Imaging (Bellingham). 2020 Jan;7(1):014004. doi: 10.1117/1.JMI.7.1.014004. Epub 2020 Feb 22.
Frisken S, Luo M, Juvekar P, Bunevicius A, Machado I, Unadkat P, Bertotti MM, Toews M, Wells WM, Miga MI, Golby AJ. A comparison of thin-plate spline deformation and finite element modeling to compensate for brain shift during tumor resection. Int J Comput Assist Radiol Surg. 2020 Jan;15(1):75-85. doi: 10.1007/s11548-019-02057-2. Epub 2019 Aug 23.
Liu Y, D'Haese PF, Newton AT, Dawant BM. Generation of human thalamus atlases from 7 T data and application to intrathalamic nuclei segmentation in clinical 3 T T1-weighted images. Magn Reson Imaging. 2020 Jan;65:114-128. doi: 10.1016/j.mri.2019.09.004. Epub 2019 Oct 16.
Bow H, Yang X, Chotai S, Feldman M, Yu H, Englot DJ, Miga MI, Pruthi S, Dawant BM, Parker SL Initial Experience with Using a Structured Light 3D Scanner and Image Registration to Plan Bedside Subdural Evacuating Port System Placement. World Neurosurg. 2020 Feb 4;137:350-356. doi: 10.1016/j.wneu.2020.01.203.
Zhang D, Wang J, Noble JH, Dawant BM. HeadLocNet: Deep convolutional neural networks for accurate classification and multi-landmark localization of head CTs Med Image Anal. 2020 Apr;61:101659. doi: 10.1016/j.media.2020.101659. Epub 2020 Jan 28.
Morrel WG, Holder JT, Dawant BM, Noble JH, Labadie RF. Effect of Scala Tympani Height on Insertion Depth of Straight Cochlear Implant Electrodes. Otolaryngol Head Neck Surg. 2020 Feb 25:194599820904941. doi: 10.1177/0194599820904941.
2019
Byram B, Dei K, Schlunk S, Luchies A. Advanced beamforming for improved functional assessment in echocardiography The Journal of the Acoustical Society of America March 2019, 145(3):1702-1703
Tierney JE, Schlunk SG, Jones R, George M, Karve P, Duddu R, Byram BC, Hsi RS. In vitro feasibility of next generation non-linear beamforming ultrasound methods to characterize and size kidney stones. Urolithiasis. 2019 Apr;47(2):181-188.
Orekhov AL, Simaan S. Directional Stiffness Modulation of Parallel Robots With Kinematic Redundancy and Variable Stiffness Joints Mechanisms Robotics. Oct 2019, 11(5): 051003
Wang L, Del Giudice J, Simaan N. Simplified Kinematics of Continuum Robot Equilibrium Modulation via Moment Coupling Effects and Model Calibration J. Mechanisms Robotics. Oct 2019 11(5): 051013
Schwartz N, Oguz I, Wang J, Pouch A, Yushkevich N, Parameshwaran S, Gee J, Yushkevich P, Oguz B. Fully automated placental volume quantification from 3DUS for prediction of small-for-gestational age infants American Journal of Obstetrics and Gynecology 2019 Jan;220(1):S672-S673
Prasanna Parvathaneni, Shunxing Bao, Allison Hainline, Yuankai Huo, Kurt G Schilling, Hakmook Kang, Owen Williams, Neil D Woodward, Susan M Resnick, David H Zald, Ilwoo Lyu, Bennett A Landman. Harmonization of White and Gray Matter Features in Diffusion Microarchitecture for Cross-Sectional Studies Computer Aided Intervention and Diagnostics in Clinical and Medical Images February 2019 31: 21-29
Schilling KG, Gao Y, Christian M, Janve V, Stepniewska I, Landman BA, Anderson AW. A Web-Based Atlas Combining MRI and Histology of the Squirrel Monkey Brain. Neuroinformatics. 2019 Jan;17(1):131-145.
Aboud KS, Huo Y, Kang H, Ealey A, Resnick SM, Landman BA, Cutting LE. Structural covariance across the lifespan: Brain development and aging through the lens of inter-network relationships. Hum Brain Mapp. 2019 Jan;40(1):125-136.
Schilling KG, Nath V, Hansen C, Parvathaneni P, Blaber J, Gao Y, Neher P, Aydogan DB, Shi Y, Ocampo-Pineda M, Schiavi S, Daducci A, Girard G, Barakovic M, Rafael-Patino J, Romascano D, Rensonnet G, Pizzolato M, Bates A, Fischi E, Thiran JP, Canales-Rodríguez EJ, Huang C, Zhu H, Zhong L, Cabeen R, Toga AW, Rheault F, Theaud G, Houde JC, Sidhu J, Chamberland M, Westin CF, Dyrby TB, Verma R, Rathi Y, Irfanoglu MO, Thomas C, Pierpaoli C, Descoteaux M, Anderson AW, Landman BA. Limits to anatomical accuracy of diffusion tractography using modern approaches. Neuroimage. 2019 Jan 15;185:1-11.
Antic S, Osterman T, Balar A, Lakhani D, Nguyen R, Block S, Fileds K, Winston B, Muterspaugh A, Huo Y, Gao R, Leader J, Wilson D, Nair V, Gillies R, Schabath M, Shah C, Landman B, Massion P. Development of a lung nodule cohort with integrated clinical, molecular and imaging biomarkers Cancer Research July 2019 79(S13): 3317-3317
Huo Y, Terry JG, Wang J, Nair S, Lasko TA, Freedman BI, Carr JJ, Landman BA. Fully automatic liver attenuation estimation combing CNN segmentation and morphological operations. Med Phys. 2019 Aug;46(8):3508-3519.
Heaster TM, Landman BA, Skala MC. Quantitative Spatial Analysis of Metabolic Heterogeneity Across in vivo and in vitro Tumor Models. Front Oncol. 2019 Nov 1;9:1144. doi: 10.3389/fonc.2019.01144. eCollection 2019.
Russell PT, Webster RJ 3RD, Mawn L, Remirez A, Emerson M, Bruns T On the Feasibility of Orbital Apex Surgery with a Concentric Tube Robot J Neurol Surg B 2019; 80(S 01): S1-S244
Patrick S Wellborn, Paul T Russell, Robert J Webster III A multi-subject accuracy study on granular jamming for non-invasive attachment of fiducial markers to patients International Journal of Computer Assisted Radiology and Surgery July 2019: 15:69-74
Moehlman TM, de Zwart JA, Chappel-Farley MG, Liu X, McClain IB, Chang C, Mandelkow H, Özbay PS, Johnson NL, Bieber RE, Fernandez KA, King KA, Zalewski CK, Brewer CC, van Gelderen P, Duyn JH, Picchioni D. All-night functional magnetic resonance imaging sleep studies J Neurosci Methods. 2019 Mar 15;316:83-98. doi: 10.1016/j.jneumeth.2018.09.019. Epub 2018 Sep 20.
Özbay PS, Chang C, Picchioni D, Mandelkow H, Chappel-Farley MG, van Gelderen P, de Zwart JA, Duyn J. Sympathetic activity contributes to the fMRI signal Commun Biol. 2019 Nov 18;2:421. doi: 10.1038/s42003-019-0659-0. eCollection 2019.
Simony E, Chang C. Analysis of stimulus-induced brain dynamics during naturalistic paradigms Neuroimage. 2019 Dec 13:116461. doi: 10.1016/j.neuroimage.2019.116461. [Epub ahead of print]
Sandler K, Gao R, Huo Y, Paulson P, Williams J, Massion P, Deppen S, Landman BA Novel Flexible Longitudinal Machine Learning Coupled with Patient Demographics Improves Lung Cancer Risk Prediction Using Whole Screening CTs Journal of Thoracic Oncology Oct 2019; 14, (10); S791-S792
Chaganti S, Welty VF, Taylor W, Albert K, Failla MD, Cascio C, Smith S, Mawn L, Resnick SM, Beason-Held LL, Bagnato F, Lasko T, Blume JD, Landman BA. Discovering novel disease comorbidities using electronic medical records. PLoS One. 2019 Nov 27;14(11):e0225495. doi: 10.1371/journal.pone.0225495. eCollection 2019.
Huo Y, Tang Y, Chen Y, Gao D, Han S, Bao S, De S, Terry JG, Carr JJ, Abramson RG, Landman BA. Stochastic tissue window normalization of deep learning on computed tomography. J Med Imaging (Bellingham). 2019 Oct;6(4):044005. doi: 10.1117/1.JMI.6.4.044005. Epub 2019 Nov 20.
Yushkevich PA, Pashchinskiy A, Oguz I, Mohan S, Schmitt JE, Stein JM, Zukić D, Vicory J, McCormick M, Yushkevich N, Schwartz N, Gao Y, Gerig G. User-Guided Segmentation of Multi-modality Medical Imaging Datasets with ITK-SNAP. Neuroinformatics. 2019 Jan;17(1):83-102. doi: 10.1007/s12021-018-9385-x.
El-Haddad MT, Tao YK. Non-contact characterization of compound optical elements using reflectance confocal microscopy, low-coherence interferometry, and computational ray-tracing. Sci Rep 2019 Nov 10;9(1):17111
Malone JD, El-Haddad MT, Yerramreddy SS, Oguz I, Tao YK. Handheld spectrally encoded coherence tomography and reflectometry for motion-corrected ophthalmic optical coherence tomography and optical coherence tomography angiography. Neurophotonics. 2019 Oct;6(4):041102. doi: 10.1117/1.NPh.6.4.041102. Epub 2019 Jul 3.
Dohm AE, Nickles T, Johnson H, Miga MI, Attia A, Chan MD, Weis JA Imaging-driven Biophysical Model for the Differentiation of Tumor Progression from Radiation Necrosis International Journal of Radiation Oncology Sept 19; 105 (1); S31
Yang X, Narasimhan S, Luo M, Thompson RC, Chambless LB, Morone PJ, He L, Dawant BM, Miga MI. Development and evaluation of a "trackerless" surgical planning and guidance system based on 3D Slicer. J Med Imaging (Bellingham). 2019 Jul;6(3):035002. doi: 10.1117/1.JMI.6.3.035002. Epub 2019 Sep 4.
Chakravorti S, Noble JH, Gifford RH, Dawant BM, O'Connell BP, Wang J, Labadie RF. Further evidence of the relationship between cochlear implant electrode positioning and hearing outcomes Otol Neurotol. 2019 Jun;40(5):617-624.
Berg K, JH, Dawant BM, Dwyer R, Labadie RF, Gifford RH Effect of number of channels and speech coding strategy on speech recognition in mid-scala electrode recipients The Journal of the Acoustical Society of America 2019 Mar;145 (3):1796-1797
Morrel WG, Jayawardena ADL, M Amberg S, Dawant BM, Noble JH, Labadie RF. Revision surgery following minimally invasive image‐guided cochlear implantation Laryngoscope. 2019 Jun;129(6):1458-1461.
Riggs WJ, Dwyer RT, Holder JT, Mattingly JK, Ortmann A, Noble JH, Dawant BM, Valenzuela CV, O'Connell BP, Harris MS, Litvak LM, Koka K, Buchman CA, Labadie RF, Adunka OF. Intracochlear Electrocochleography: Influence of Scalar Position of the Cochlear Implant Electrode on Postinsertion Results Otol Neurotol. 2019 Jun;40(5):e503-e510.
Wang J, Noble JH, Dawant BM. Metal artifact reduction for the segmentation of the intra cochlear anatomy in CT images of the ear with 3D-conditional GANs. Med Image Anal. 2019 Dec;58:101553. doi: 10.1016/j.media.2019.101553. Epub 2019 Sep 4.
Goodale SE, González HFJ, Johnson GW, Gupta K, Rodriguez WJ, Shults R, Rogers BP, Rolston JD, Dawant BM, Morgan VL, Englot DJ. Resting-State SEEG May Help Localize Epileptogenic Brain Regions. Neurosurgery. 2019 Sep 16. pii: nyz351. doi: 10.1093/neuros/nyz351. [Epub ahead of print]
Bermudez Noguera C, Bao S, Petersen KJ, Lopez AM, Reid J, Plassard AJ, Zald DH, Claassen DO, Dawant BM, Landman BA. Using deep learning for a diffusion-based segmentation of the dentate nucleus and its benefits over atlas-based methods. J Med Imaging (Bellingham). 2019 Oct;6(4):044007. doi: 10.1117/1.JMI.6.4.044007. Epub 2019 Dec 6.
Labadie RF, Schefano AD, Holder JT, Dwyer RT, Rivas A, O'Malley MR, Noble JH, Dawant BM. Use of intraoperative CT scanning for quality control assessment of cochlear implant electrode array placement. Acta Otolaryngol. 2020 Mar;140(3):206-211. doi: 10.1080/00016489.2019.1698768. Epub 2019 Dec 20.
Bermudez C, Plassard AJ, Chaganti S, Huo Y, Aboud KS, Cutting LE, Resnick SM, Landman BA. Anatomical context improves deep learning on the brain age estimation task. Magn Reson Imaging. 2019 Oct;62:70-77. doi: 10.1016/j.mri.2019.06.018. Epub 2019 Jun 24.
Lyu I, Kang H, Woodward ND, Styner MA, Landman BA. Hierarchical spherical deformation for cortical surface registration. Med Image Anal. 2019 Oct;57:72-88. doi: 10.1016/j.media.2019.06.013. Epub 2019 Jun 29.
Ford JB, Ganguly M, Poorman ME, Grissom WA, Jenkins MW, Chiel HJ, Jansen ED. Identifying the Role of Block Length in Neural Heat Block to Reduce Temperatures During Infrared Neural Inhibition.. Lasers Surg Med. 2019 Jul 25. doi: 10.1002/lsm.23139. [Epub ahead of print]
Phipps MA, Jonathan SV, Yang PF, Chaplin V, Chen LM, Grissom WA, Caskey CF. Considerations for ultrasound exposure during transcranial MR acoustic radiation force imaging. Sci Rep. 2019 Nov 7;9(1):16235. doi: 10.1038/s41598-019-52443-8.
Norton JC, Slawinski PR, Lay HS, Martin JW, Cox BF, Cummins G, Desmulliez MPY, Clutton RE, Obstein KL, Cochran S, Valdastri P. Intelligent magnetic manipulation for gastrointestinal ultrasound. Sci Robot. 2019 Jun 26;4(31). pii: eaav7725. doi: 10.1126/scirobotics.aav7725. Epub 2019 Jun 19.
Garbin N, Mamunes AP, Sohn D, Hawkins RW, Valdastri P, Obstein KL. Evaluation of a novel low-cost disposable endoscope for visual assessment of the esophagus and stomach in an ex-vivo phantom model. Endosc Int Open. 2019 Sep;7(9):E1175-E1183. doi: 10.1055/a-0914-2749. Epub 2019 Aug 29.
González HFJ, Goodale SE, Jacobs ML, Haas KF, Landman BA, Morgan VL, Englot DJ. Brainstem Functional Connectivity Disturbances in Epilepsy may Recover After Successful Surgery. Neurosurgery. 2019 May 16. pii: nyz128. doi: 10.1093/neuros/nyz128. [Epub ahead of print]
Nath V, Schilling KG, Parvathaneni P, Hansen CB, Hainline AE, Huo Y, Blaber JA, Lyu I, Janve V, Gao Y, Stepniewska I, Anderson AW, Landman BA. Deep learning reveals untapped information for local white-matter fiber reconstruction in diffusion-weighted MRI. Magn Reson Imaging. 2019 Oct;62:220-227. doi: 10.1016/j.mri.2019.07.012. Epub 2019 Jul 16.
Schilling KG, By S, Feiler HR, Box BA, O'Grady KP, Witt A, Landman BA, Smith SA. Diffusion MRI microstructural models in the cervical spinal cord - Application, normative values, and correlations with histological analysis. Neuroimage. 2019 Nov 1;201:116026. doi: 10.1016/j.neuroimage.2019.116026. Epub 2019 Jul 19.
Remedios SW, Roy S, Bermudez C, Patel MB, Butman JA, Landman BA, Pham DL. Distributed Deep Learning Across Multi-site Datasets for Generalized CT Hemorrhage Segmentation. Med Phys. 2019 Oct 29. doi: 10.1002/mp.13880. [Epub ahead of print]
Daniels AB, Froehler MT, Nunnally AH, Pierce JM, Bozic I, Stone CA, Santapuram PR, Tao YK, Boyd KL, Himmel LE, Chen SC, Du L, Friedman DL, Richmond A. Rabbit Model of Intra-Arterial Chemotherapy Toxicity Demonstrates Retinopathy and Vasculopathy Related to Drug and Dose, Not Procedure or Approach. Invest Ophthalmol Vis Sci. 2019 Mar 1;60(4):954-964. doi: 10.1167/iovs.18-25346.
Tierney J, Baker J, Borgmann A, Brown D, Byram B. Non-contrast power Doppler ultrasound imaging for early assessment of trans-arterial chemoembolization of liver tumors. Sci Rep. 2019 Sep 10;9(1):13020. doi: 10.1038/s41598-019-49448-8.
Frisken S, Luo M, Juvekar P, Bunevicius A, Machado I, Unadkat P, Bertotti MM, Toews M, Wells WM, Miga MI, Golby AJ. A comparison of thin-plate spline deformation and finite element modeling to compensate for brain shift during tumor resection. Int J Comput Assist Radiol Surg. 2019 Aug 23. doi: 10.1007/s11548-019-02057-2. [Epub ahead of print]
Yang X, Narasimhan S, Luo M, Thompson RC, Chambless LB, Morone PJ, He L, Dawant BM, Miga MI. Development and evaluation of a "trackerless" surgical planning and guidance system based on 3D Slicer. J Med Imaging (Bellingham). 2019 Jul;6(3):035002. doi: 10.1117/1.JMI.6.3.035002. Epub 2019 Sep 4.
Gafford JB, Webster S, Dillon N, Blum E, Hendrick R, Maldonado F, Gillaspie EA, Rickman OB, Herrell SD, Webster RJ 3rd. A Concentric Tube Robot System for Rigid Bronchoscopy: A Feasibility Study on Central Airway Obstruction Removal. Ann Biomed Eng. 2019 Jul 24. doi: 10.1007/s10439-019-02325-x. [Epub ahead of print]
Liu Y, D'Haese PF, Newton AT, Dawant BM. Generation of human thalamus atlases from 7 T data and application to intrathalamic nuclei segmentation in clinical 3 T T1-weighted images. Magn Reson Imaging. 2019 Oct 16. pii: S0730-725X(19)30470-9. doi: 10.1016/j.mri.2019.09.004. [Epub ahead of print]
Berg K, Noble J, Dawant B, Dwyer R, Labadie R, Richards V, Gifford R. Musical Sound Quality as a Function of the Number of Channels in Modern Cochlear Implant Recipients. Front Neurosci. 2019 Sep 24;13:999. doi: 10.3389/fnins.2019.00999. eCollection 2019.
Scaglioni B, Previtera L, Martin J, Norton J, Obstein KL, Valdastri P. Explicit Model Predictive Control of a Magnetic Flexible Endoscope. IEEE Robot Autom Lett. 2019 Apr;4(2):716-723. doi: 10.1109/LRA.2019.2893418. Epub 2019 Jan 16.
Poorman ME, Braškutė I, Bartels LW, Grissom WA. Multi-echo MR thermometry using iterative separation of baseline water and fat images. Magn Reson Med. 2019 Apr;81(4):2385-2398. doi: 10.1002/mrm.27567. Epub 2018 Nov 5.
González HFJ, Chakravorti S, Goodale SE, Gupta K, Claassen DO, Dawant B, Morgan VL, Englot DJ. Thalamic arousal network disturbances in temporal lobe epilepsy and improvement after surgery. J Neurol Neurosurg Psychiatry. 2019 May 23. pii: jnnp-2019-320748. doi: 10.1136/jnnp-2019-320748. [Epub ahead of print]
Morgan VL, Rogers BP, González HFJ, Goodale SE, Englot DJ. Characterization of postsurgical functional connectivity changes in temporal lobe epilepsy. J Neurosurg. 2019 Jun 14:1-11. doi: 10.3171/2019.3.JNS19350. [Epub ahead of print]
Yasin R, Dedmon M, Dillon N, Simaan N. Investigating variability in cochlear implant electrode array alignment and the potential of visualization guidance. Int J Med Robot. 2019 May 16:e2009. doi: 10.1002/rcs.2009. [Epub ahead of print]
Dei K, Schlunk S, Byram B. Computationally-Efficient Implementation of Aperture Domain Model Image Reconstruction (ADMIRE). IEEE Trans Ultrason Ferroelectr Freq Control. 2019 May;66(5):834-848. doi: 10.1109/TUFFC.2019.2898127. Epub 2019 Feb 7.
Moon H, Huo Y, Abramson RG, Peters RA, Assad A, Moyo TK, Savona MR, Landman BA. Acceleration of spleen segmentation with end-to-end deep learning method and automated pipeline. Comput Biol Med. 2019 Apr;107:109-117. doi: 10.1016/j.compbiomed.2019.01.018. Epub 2019 Feb 5.
González-Villà S, Oliver A, Huo Y, Lladó X, Landman BA. Brain structure segmentation in the presence of multiple sclerosis lesions. Neuroimage Clin. 2019;22:101709. doi: 10.1016/j.nicl.2019.101709. Epub 2019 Feb 14.
Bao S, Bermudez C, Huo Y, Parvathaneni P, Rodriguez W, Resnick SM, D'Haese PF, McHugo M, Heckers S, Dawant BM, Lyu I, Landman BA. Registration-based image enhancement improves multi-atlas segmentation of the thalamic nuclei and hippocampal subfields. Magn Reson Imaging. 2019 Jun;59:143-152. doi: 10.1016/j.mri.2019.03.014. Epub 2019 Mar 15.
Schilling KG, Gao Y, Stepniewska I, Janve V, Landman BA, Anderson AW. Histologically derived fiber response functions for diffusion MRI vary across white matter fibers-An ex vivo validation study in the squirrel monkey brain. NMR Biomed. 2019 Jun;32(6):e4090. doi: 10.1002/nbm.4090. Epub 2019 Mar 25.
Huo Y, Xu Z, Xiong Y, Aboud K, Parvathaneni P, Bao S, Bermudez C, Resnick SM, Cutting LE, Landman BA 3D whole brain segmentation using spatially localized atlas network tiles. Neuroimage. 2019 Jul 1;194:105-119. doi: 10.1016/j.neuroimage.2019.03.041. Epub 2019 Mar 23.
Hainline AE, Nath V, Parvathaneni P, Schilling KG, Blaber JA, Anderson AW, Kang H, Landman BA. A deep learning approach to estimation of subject-level bias and variance in high angular resolution diffusion imaging. Magn Reson Imaging. 2019 Jun;59:130-136. doi: 10.1016/j.mri.2019.03.021. Epub 2019 Mar 26.
Morgan VL, Rogers BP, Anderson AW, Landman BA, Englot DJ. Divergent network properties that predict early surgical failure versus late recurrence in temporal lobe epilepsy. J Neurosurg. 2019 Apr 5:1-10. doi: 10.3171/2019.1.JNS182875. [Epub ahead of print]
Schilling KG, Blaber J, Huo Y, Newton A, Hansen C, Nath V, Shafer AT, Williams O, Resnick SM, Rogers B, Anderson AW, Landman BA. Synthesized b0 for diffusion distortion correction (Synb0-DisCo). Magn Reson Imaging. 2019 May 7. pii: S0730-725X(18)30617-9. doi: 10.1016/j.mri.2019.05.008. [Epub ahead of print]
González HFJ, Goodale SE, Jacobs ML, Haas KF, Landman BA, Morgan VL, Englot DJ. Brainstem Functional Connectivity Disturbances in Epilepsy may Recover After Successful Surgery. Neurosurgery. 2019 May 16. pii: nyz128. doi: 10.1093/neuros/nyz128. [Epub ahead of print]
Parvathaneni P, Lyu I, Huo Y, Rogers BP, Schilling KG, Nath V, Blaber JA, Hainline AE, Anderson AW, Woodward ND, Landman BA. Improved gray matter surface based spatial statistics in neuroimaging studies. Magn Reson Imaging. 2019 May 22;61:285-295. doi: 10.1016/j.mri.2019.05.016. [Epub ahead of print]
Nath V, Schilling KG, Parvathaneni P, Huo Y, Blaber JA, Hainline AE, Barakovic M, Romascano D, Rafael-Patino J, Frigo M, Girard G, Thiran JP, Daducci A, Rowe M, Rodrigues P, Prčkovska V, Aydogan DB, Sun W, Shi Y, Parker WA, Ould Ismail AA, Verma R, Cabeen RP, Toga AW, Newton AT, Wasserthal J, Neher P, Maier-Hein K, Savini G, Palesi F, Kaden E, Wu Y, He J, Feng Y, Paquette M, Rheault F, Sidhu J, Lebel C, Leemans A, Descoteaux M, Dyrby TB, Kang H, Landman BA. Tractography reproducibility challenge with empirical data (TraCED): The 2017 ISMRM diffusion study group challenge. J Magn Reson Imaging. 2019 Jun 9. doi: 10.1002/jmri.26794. [Epub ahead of print]
Chaganti S, Mundy K, DeLisi MP, Nelson KM, Harrigan RL, Galloway RL, Landman BA, Mawn LA. Assessment of Orbital Computed Tomography (CT) Imaging Biomarkers in Patients with Thyroid Eye Disease. J Digit Imaging. 2019 Jun 13. doi: 10.1007/s10278-019-00195-2. [Epub ahead of print]
Parvathaneni P, Nath V, McHugo M, Huo Y, Resnick SM, Woodward ND, Landman BA, Lyu I. Improving human cortical sulcal curve labeling in large scale cross-sectional MRI using deep neural networks. J Neurosci Methods. 2019 Jun 12;324:108311. doi: 10.1016/j.jneumeth.2019.108311. [Epub ahead of print]
Huo Y, Terry JG, Wang J, Nair S, Lasko TA, Freedman BI, Carr JJ, Landman BA Fully automatic liver attenuation estimation combing CNN segmentation and morphological operations. Med Phys. 2019 Jun 22. doi: 10.1002/mp.13675. [Epub ahead of print]
Bermudez C, Plassard AJ, Chaganti S, Huo Y, Aboud KS, Cutting LE, Resnick SM, Landman BA Anatomical context improves deep learning on the brain age estimation task. Magn Reson Imaging. 2019 Jun 24;62:70-77. doi: 10.1016/j.mri.2019.06.018. [Epub ahead of print]
Lyu I, Kang H, Woodward ND, Styner MA, Landman BA Hierarchical spherical deformation for cortical surface registration. Magn Reson Imaging. 2019 Jun 24;62:70-77. doi: 10.1016/j.mri.2019.06.018. [Epub ahead of print]
Riojas KE, Hendrick RJ, Webster RJ 3rd Can Elastic Instability be Beneficial in Concentric Tube Robots? IEEE Robot Autom Lett. 2018 Jul;3(3):1624-1630. doi: 10.1109/LRA.2018.2800779. Epub 2018 Feb 1
Fu M, Kuntz A, Webster RJ 3rd, Alterovitz R. Safe Motion Planning for Steerable Needles Using Cost Maps Automatically Extracted from Pulmonary Images. IEEE Trans Biomed Eng. 2019 Feb 26. doi: 10.1109/TBME.2019.2901751. [Epub ahead of print]
Narasimhan S, Johnson HB, Nickles TM, Miga MI, Rana N, Attia A, Weis JA Biophysical model-based parameters to classify tumor recurrence from radiation-induced necrosis for brain metastases. Med Phys. 2019 May;46(5):2487-2496. doi: 10.1002/mp.13461. Epub 2019 Mar 14.
Collins JA, Heiselman JS, Clements LW, Brown DB, Miga MI. Multiphysics modeling toward enhanced guidance in hepatic microwave ablation: a preliminary framework. J Med Imaging (Bellingham). 2019 Apr;6(2):025007. doi: 10.1117/1.JMI.6.2.025007. Epub 2019 May 20.
Morrel WG, Jayawardena ADL, M Amberg S, Dawant BM, Noble JH, Labadie RF Revision surgery following minimally invasive image-guided cochlear implantation. Laryngoscope. 2019 Jun;129(6):1458-1461. doi: 10.1002/lary.27636. Epub 2018 Dec 24
Tkaczyk ER, Coco JR, Wang J, Chen F, Ye C, Jagasia MH, Dawant BM, Fabbri D Crowdsourcing to delineate skin affected by chronic graft-vs-host disease. Skin Res Technol. 2019 Feb 20. doi: 10.1111/srt.12688. [Epub ahead of print]
Bao S, Bermudez C, Huo Y, Parvathaneni P, Rodriguez W, Resnick SM, D'Haese PF, McHugo M, Heckers S, Dawant BM, Lyu I, Landman BA Registration-based image enhancement improves multi-atlas segmentation of the thalamic nuclei and hippocampal subfields. Magn Reson Imaging. 2019 Jun;59:143-152. doi: 10.1016/j.mri.2019.03.014. Epub 2019 Mar 15
Berg KA, Noble JH, Dawant BM, Dwyer RT, Labadie RF, Gifford RH Speech recognition as a function of the number of channels in perimodiolar electrode recipients. J Acoust Soc Am. 2019 Mar;145(3):1556. doi: 10.1121/1.5092350
Chakravorti S, Noble JH, Gifford RH, Dawant BM, O'Connell BP, Wang J, Labadie RF Further Evidence of the Relationship Between Cochlear Implant Electrode Positioning and Hearing Outcomes. Otol Neurotol. 2019 Jun;40(5):617-624.
Riggs WJ, Dwyer RT, Holder JT, Mattingly JK, Ortmann A, Noble JH, Dawant BM, Valenzuela CV, O'Connell BP, Harris MS, Litvak LM, Koka K, Buchman CA, Labadie RF, Adunka OF Intracochlear Electrocochleography: Influence of Scalar Position of the Cochlear Implant Electrode on Postinsertion Results. Otol Neurotol. 2019 Jun
Wu C, Jermakowicz WJ, Chakravorti S, Cajigas I, Sharan AD, Jagid JR, Matias CM, Sperling MR, Buckley R, Ko A, Ojemann JG, Miller JW, Youngerman B, Sheth SA, McKhann GM, Laxton AW, Couture DE, Popli GS, Smith A, Mehta AD, Ho AL, Halpern CH, Englot DJ, Neimat JS, Konrad PE, Neal E, Vale FL, Holloway KL, Air EL, Schwalb J, Dawant BM, D'Haese PF Effects of surgical targeting in laser interstitial thermal therapy for mesial temporal lobe epilepsy: A multicenter study of 234 patients. Epilepsia. 2019 Jun;60(6):1171-1183. doi: 10.1111/epi.15565. Epub 2019 May 21
Plassard AJ, Bao S, D'Haese PF, Pallavaram S, Claassen DO, Dawant BM, Landman BA Multi-modal imaging with specialized sequences improves accuracy of the automated subcortical grey matter segmentation. Magn Reson Imaging. 2019 May 21;61:131-136. doi: 10.1016/j.mri.2019.05.025. [Epub ahead of print]
González HFJ, Chakravorti S, Goodale SE, Gupta K, Claassen DO, Dawant B, Morgan VL, Englot DJ Thalamic arousal network disturbances in temporal lobe epilepsy and improvement after surgery. J Neurol Neurosurg Psychiatry. 2019 May 23. pii: jnnp-2019-320748. doi: 10.1136/jnnp-2019-320748. [Epub ahead of print]
Luchies AC, Byram BC Training improvements for ultrasound beamforming with deep neural networks. Phys Med Biol. 2019 Jan 10. doi: 10.1088/1361-6560/aafd50. [Epub ahead of print]
Schilling KG, Yeh FC, Nath V, Hansen C, Williams O, Resnick S, Anderson AW, Landman BA. A fiber coherence index for quality control of B-table orientation in diffusion MRI scans. Magn Reson Imaging. 2019 Jan 22;58:82-89. doi: 10.1016/j.mri.2019.01.018. [Epub ahead of print]
Pak LM, Gagnière J, Allen PJ, Balachandran VP, D'Angelica MI, DeMatteo RP, Jarnagin WR, Miga MI, Simpson AL, Kingham TP Utility of Image Guidance in the Localization of Disappearing Colorectal Liver Metastases. J Gastrointest Surg. 2019 Jan 24. doi: 10.1007/s11605-019-04106-2. [Epub ahead of print]
Zhao Y, Chakravorti S, Labadie RF, Dawant BM, Noble JH. Automatic graph-based method for localization of cochlear implant electrode arrays in clinical CT with sub-voxel accuracy. Med Image Anal. 2019 Feb;52:1-12. doi: 10.1016/j.media.2018.11.005. Epub 2018 Nov 13.
Juttukonda MR, Franco G, Englot DJ, Lin YC, Petersen KJ, Trujillo P, Hedera P, Landman BA, Kang H, Donahue MJ, Konrad PE, Dawant BM, Claassen DO White matter differences between essential tremor and Parkinson disease. Neurology. 2019 Jan 1;92(1):e30-e39. doi: 10.1212/WNL.0000000000006694. Epub 2018 Nov 30.
2018
Narasimhan S, Weis JA, González HFJ, Thompson RC, Miga MI. In vivo modeling of interstitial pressure in a porcine model: approximation of poroelastic properties and effects of enhanced anatomical structure modeling. J Med Imaging (Bellingham). 2018 Oct;5(4):045002. doi: 10.1117/1.JMI.5.4.045002. Epub 2018 Dec 6.
Zhao Y, Labadie RF, Dawant BM, Noble JH. Validation of automatic cochlear implant electrode localization techniques using μCTs. J Med Imaging (Bellingham). 2018 Jul;5(3):035001. doi: 10.1117/1.JMI.5.3.035001. Epub 2018 Sep 24.
Hsi RS, Schlunk SG, Tierney JE, Dei K, Jones R, George M, Karve P, Duddu R, Byram BC Feasibility of non-linear beamforming ultrasound methods to characterize and size kidney stones. PLoS One. 2018 Aug 28;13(8):e0203138. doi: 10.1371/journal.pone.0203138. eCollection 2018.
Garbin N, Wang L, Chandler JH, Obstein KL, Simaan N, Valdastri P Dual-Continuum Design Approach for Intuitive and Low-Cost Upper Gastrointestinal Endoscopy. IEEE Trans Biomed Eng. 2018 Nov 16. doi: 10.1109/TBME.2018.2881717. [Epub ahead of print]
Williams OA, An Y, Beason-Held L, Huo Y, Ferrucci L, Landman BA, Resnick SM. Vascular burden and APOE ε4 are associated with white matter microstructural decline in cognitively normal older adults. Neuroimage. 2018 Dec 15;188:572-583. doi: 10.1016/j.neuroimage.2018.12.009. [Epub ahead of print]
Chaganti S, Mawn LA, Kang H, Egan J, Resnick SM, Beason-Held LL, Landman BA, Lasko T. Electronic Medical Record Context Signatures Improve Diagnostic Classification using Medical Image Computing. IEEE J Biomed Health Inform. 2018 Dec 28. doi: 10.1109/JBHI.2018.2890084. [Epub ahead of print]
Koka K, Riggs WJ, Dwyer R, Holder JT, Noble JH, Dawant BM, Ortmann A, Valenzuela CV, Mattingly JK, Harris MM, O'Connell BP, Litvak LM, Adunka OF, Buchman CA, Labadie RF Intra-Cochlear Electrocochleography During Cochear Implant Electrode Insertion Is Predictive of Final Scalar Location Otol Neurotol. 2018 Sep;39(8):e654-e659. doi: 10.1097/MAO.0000000000001906.
Zhao Y, Dawant BM, Labadie RF, Noble JH. Automatic localization of closely spaced cochlear implant electrode arrays in clinical CTs Med Phys. 2018 Nov;45(11):5030-5040. doi: 10.1002/mp.13185. Epub 2018 Oct 8
Morrel WG, Jayawardena ADL, M Amberg S, Dawant BM, Noble JH, Labadie RF. Revision surgery following minimally invasive image-guided cochlear implantation. Laryngoscope. 2018 Dec 24. doi: 10.1002/lary.27636. [Epub ahead of print]
El-Haddad MT, Bozic I, Tao YK. Spectrally encoded coherence tomography and reflectometry: Simultaneous en face and cross-sectional imaging at 2 gigapixels per second. J Biophotonics. 2018 Apr;11(4):e201700268. doi: 10.1002/jbio.201700268. Epub 2017 Dec 27.
Dei K, Tierney J, Byram B. Model-based beamforming with plane wave synthesis in medical ultrasound. J Med Imaging (Bellingham). 2018 Apr;5(2):027001. doi: 10.1117/1.JMI.5.2.027001. Epub 2018 Apr 26.
Dei K, Byram B. A Robust Method for Ultrasound Beamforming in the Presence of Off-Axis Clutter and Sound Speed Variation. Ultrasonics. 2018 Sep;89:34-45. doi: 10.1016/j.ultras.2018.04.011. Epub 2018 Apr 25.
Hinton KE, Lahey BB, Villalta-Gil V, Boyd BD, Yvernault BC, Werts KB, Plassard AJ, Applegate B, Woodward ND, Landman BA, Zald DH Right Fronto-Subcortical White Matter Microstructure Predicts Cognitive Control Ability on the Go/No-go Task in a Community Sample. Front Hum Neurosci. 2018 Apr 13;12:127. doi: 10.3389/fnhum.2018.00127. eCollection 2018.
Huo Y, Blaber J, Damon SM, Boyd BD, Bao S, Parvathaneni P, Noguera CB, Chaganti S, Nath V, Greer JM, Lyu I, French WR, Newton AT, Rogers BP, Landman BA. Towards Portable Large-Scale Image Processing with High-Performance Computing. J Digit Imaging. 2018 May 3. doi: 10.1007/s10278-018-0080-0. [Epub ahead of print] Review.
Englot DJ, Gonzalez HFJ, Reynolds BB, Konrad PE, Jacobs ML, Gore JC, Landman BA, Morgan VL. Relating structural and functional brainstem connectivity to disease measures in epilepsy. Neurology. 2018 May 30. pii: 10.1212/WNL.0000000000005733. doi: 10.1212/WNL.0000000000005733. [Epub ahead of print]
Holder JT, Kessler DM, Noble JH, Gifford RH, Labadie RF Prevalence of Extracochlear Electrodes: Computerized Tomography Scans, Cochlear Implant Maps, and Operative Reports. Otol Neurotol. 2018 Jun;39(5):e325-e331. doi: 10.1097/MAO.0000000000001818.
Dedmon MM, Xie DX, O Connell BP, Dillon NP, Wellborn PS, Bennett ML, Haynes DS, Labadie RF, Rivas A. Endoscopic Ear Surgery Skills Training Improves Medical Student Performance J Surg Educ. 2018 May 9. pii: S1931-7204(17)30892-9. doi: 10.1016/j.jsurg.2018.04.015. [Epub ahead of print]
Gifford RH, Noble JH, Camarata SM, Sunderhaus LW, Dwyer RT, Dawant BM, Dietrich MS, Labadie RF The Relationship Between Spectral Modulation Detection and Speech Recognition: Adult Versus Pediatric Cochlear Implant Recipients. Trends Hear. 2018 Jan-Dec;22:2331216518771176. doi: 10.1177/2331216518771176.
Petersen KJ, Reid JA, Chakravorti S, Juttukonda MR, Franco G, Trujillo P, Stark AJ, Dawant BM, Donahue MJ, Claassen DO Structural and functional connectivity of the nondecussating dentato-rubro-thalamic tract. Neuroimage. 2018 Aug 1;176:364-371. doi: 10.1016/j.neuroimage.2018.04.074. Epub 2018 May 4.
Tkaczyk ER, Chen F, Wang J, Gandelman JS, Saknite I, Dellalana LE, Jagasia MH, Dawant BM. Overcoming human disagreement assessing erythematous lesion severity on 3D photos of chronic graft-versus-host disease. Bone Marrow Transplant. 2018 May 8. doi: 10.1038/s41409-018-0211-8. [Epub ahead of print] No abstract available
Englot DJ. A modern epilepsy surgery treatment algorithm: Incorporating traditional and emerging technologies. Epilepsy Behav. 2018 Mar;80:68-74. doi: 10.1016/j.yebeh.2017.12.041. Epub 2018 Feb 2. Review.
Slawinski PR, Taddese AS, Musto KB, Sarker S, Valdastri P, Obstein KL. The First Autonomously Controlled Magnetic Flexible Endoscope for Colon Exploration. Gastroenterology. 2018 Mar 9. pii: S0016-5085(18)30312-3. doi: 10.1053/j.gastro.2018.02.037. [Epub ahead of print] No abstract available.
Tierney JE, Schlunk SG, Jones R, George M, Karve P, Duddu R, Byram BC, Hsi RS. In vitro feasibility of next generation non-linear beamforming ultrasound methods to characterize and size kidney stones. Urolithiasis. 2018 Jan 22. doi: 10.1007/s00240-018-1036-z. [Epub ahead of print]
Sarli N, Del Giudice G, De S, Dietrich MS, Herrell SD, Simaan N. Preliminary Porcine in vivo Evaluation of a Telerobotic System for Transurethral Bladder Tumor Resection & Surveillance. J Endourol. 2018 Mar 27. doi: 10.1089/end.2018.0119. [Epub ahead of print]
Schilling K, Gao Y, Janve V, Stepniewska I, Landman BA, Anderson AW. Confirmation of a gyral bias in diffusion MRI fiber tractography. Hum Brain Mapp. 2018 Mar;39(3):1449-1466. doi: 10.1002/hbm.23936. Epub 2017 Dec 19.
Hainline AE, Nath V, Parvathaneni P, Blaber JA, Schilling KG, Anderson AW, Kang H, Landman BA. Empirical single sample quantification of bias and variance in Q-ball imaging. Magn Reson Med. 2018 Feb 6. doi: 10.1002/mrm.27115. [Epub ahead of print]
Parvathaneni P, Nath V, Blaber JA, Schilling KG, Hainline AE, Mojahed E, Anderson AW, Landman BA. Empirical reproducibility, sensitivity, and optimization of acquisition protocol, for Neurite Orientation Dispersion and Density Imaging using AMICO. Magn Reson Imaging. 2018 Mar 8;50:96-109. doi: 10.1016/j.mri.2018.03.004. [Epub ahead of print]
Nath V, Schilling KG, Parvathaneni P, Blaber J, Hainline AE, Ding Z, Anderson A, Landman BA. Empirical estimation of intravoxel structure with persistent angular structure and Q-ball models of diffusion weighted MRI. J Med Imaging (Bellingham). 2018 Jan;5(1):014005. doi: 10.1117/1.JMI.5.1.014005. Epub 2018 Mar 6.
Hormuth DA 2nd, Eldridge SL, Weis JA, Miga MI, Yankeelov TE. Mechanically Coupled Reaction-Diffusion Model to Predict Glioma Growth: Methodological Details. Methods Mol Biol. 2018;1711:225-241. doi: 10.1007/978-1-4939-7493-1_11.
Griesenauer RH, Weis JA, Arlinghaus LR, Meszoely IM, Miga MI. Toward quantitative quasistatic elastography with a gravity-induced deformation source for image-guided breast surgery. J Med Imaging (Bellingham). 2018 Jan;5(1):015003. doi: 10.1117/1.JMI.5.1.015003. Epub 2018 Feb 8.
Zhang D, Zhao Y, Noble JH, Dawant BM. Selecting electrode configurations for image-guided cochlear implant programming using template matching. J Med Imaging (Bellingham). 2018 Apr;5(2):021202. doi: 10.1117/1.JMI.5.2.021202. Epub 2017 Dec 11.
Heiselman JS, Clements LW, Collins JA, Weis JA, Simpson AL, Geevarghese SK, Kingham TP, Jarnagin WR, Miga MI. Characterization and correction of intraoperative soft tissue deformation in image-guided laparoscopic liver surgery. J Med Imaging (Bellingham). 2018 Apr;5(2):021203. doi: 10.1117/1.JMI.5.2.021203. Epub 2017 Dec 14.
2017
El-Haddad MT, Bozic I, Tao YK. Spectrally encoded coherence tomography and reflectometry: Simultaneous en face and cross-sectional imaging at 2 gigapixels per second. J Biophotonics. 2017 Nov 17. doi: 10.1002/jbio.201700268. [Epub ahead of print]
Bom Braga GP, Noble JH, Gebrim EMMS, RF Labadie, RF Bento. The influence of the subarcate artery in the superior semicircular canal dehiscence and its frequency on stillbirths: illustrative cases and systematic review. Acta Otolaryngol . 2017 Dec 22: 1-6. doi: 10.1080 / 00016489.2017.1416169. [Epub ahead of print]
Yang X, Clements LW, Luo M, Narasimhan S, Thompson RC, Dawant BM, Miga MI. Stereovision-based integrated system for point cloud reconstruction and simulated brain shift validation. J Med Imaging (Bellingham). 2017 Jul;4(3):035002. doi: 10.1117/1.JMI.4.3.035002. Epub 2017 Sep 12.
Luo M, Frisken SF, Weis JA, Clements LW, Unadkat P, Thompson RC, Golby AJ, Miga MI. Retrospective study comparing model-based deformation correction to intraoperative magnetic resonance imaging for image-guided neurosurgery. J Med Imaging (Bellingham). 2017 Jul;4(3):035003. doi: 10.1117/1.JMI.4.3.035003. Epub 2017 Sep 13.
Wang J, Liu Y, Noble JH, Dawant BM Automatic selection of landmarks in T1-weighted head MRI with regression forests for image registration initialization. J Med Imaging (Bellingham). 2017 Oct;4(4):044005. doi: 10.1117/1.JMI.4.4.044005. Epub 2017 Nov
Chakravorti S, Bussey BJ, Zhao Y, Dawant BM, Labadie RF, Noble JH. Cochlear implant phantom for evaluating computed tomography acquisition parameters. J Med Imaging (Bellingham). 2017 Oct;4(4):045002. doi: 10.1117/1.JMI.4.4.045002. Epub 2017 Nov 16.
Dewan MC, Shults R, Hale AT, Sukul V, Englot DJ, Konrad P, Yu H, Neimat JS, Rodriguez W, DawantBM, Pallavaram S, Naftel RP. Stereotactic EEG via multiple single-path omnidirectional trajectories within a single platform: institutional experience with a novel technique. J Neurosurg. 2017 Dec 15:1-9. doi: 10.3171/2017.6.JNS17881. [Epub ahead of print]
Zhang D, Liu Y, Noble JH, Dawant BM Localizing landmark sets in head CTs using random forests and a heuristic search algorithm for registration initialization. J Med Imaging (Bellingham). 2017 Oct;4(4):044007. doi: 10.1117/1.JMI.4.4.044007. Epub 2017 Dec 8.
Slawinski PR, Taddese AZ, Musto KB, Obstein KL, Valdastri P. Autonomous Retroflexion of a Magnetic Flexible Endoscope. IEEE Robot Autom Lett. 2017 Jul;2(3):1352-1359. doi: 10.1109/LRA.2017.2668459. Epub 2017 Feb 13. PMID:
Tierney J, Coolbaugh C, Towse T, Byram B. Adaptive Clutter Demodulation for Non-Contrast Ultrasound Perfusion Imaging. IEEE Trans Med Imaging. 2017 Jun 13. doi: 10.1109/TMI.2017.2714901. [Epub ahead of print]
Cakir A, Dwyer RT, Noble JH. Evaluation of a high-resolution patient-specific model of the electrically stimulated cochlea. J Med Imaging (Bellingham). 2017 Apr;4(2):025003. doi: 10.1117/1.JMI.4.2.025003. Epub 2017 Jun 14.
Sarli N, Marien T, Mitchell CR, Del Giudice G, Dietrich MS, Herrell SD, Simaan N. Kinematic and experimental investigation of manual resection tools for transurethral bladder tumor resection. Int J Med Robot. 2017 Jun;13(2). doi: 10.1002/rcs.1757. Epub 2016 Oct 20.
Swaney PJ, Mahoney AW, Hartley BI, Remirez AA, Lamers E, Feins RH, Alterovitz R, Webster RJ 3rd. Toward Transoral Peripheral Lung Access: Combining Continuum Robots and Steerable Needles. J Med Robot Res. 2017 Mar;2(1). pii: 1750001. doi: 10.1142/S2424905X17500015. Epub 2016 Oct 11.
Mizuta M, Kurita T, Dillon NP, Kimball EE, Garrett CG, Sivasankar MP, Webster RJ 3rd, Rousseau B. In vivo measurement of vocal fold surface resistance. Laryngoscope. 2017 Jun 2. doi: 10.1002/lary.26715. [Epub ahead of print]
Comber DB, Pitt EB, Gilbert HB, Powelson MW, Matijevich E, Neimat JS, Webster RJ 3rd, Barth EJ. Optimization of Curvilinear Needle Trajectories for Transforamenal Hippocampotomy. Oper Neurosurg (Hagerstown). 2017 Feb;13(1):15-22. doi: 10.1227/NEU.0000000000001361. Epub 2016 Jul 25.
McBrayer KL, Wanna GB, Dawant BM, Balachandran R, Labadie RF, Noble JH. Resection planning for robotic acoustic neuroma surgery. J Med Imaging (Bellingham). 2017 Apr;4(2):025002. doi: 10.1117/1.JMI.4.2.025002. Epub 2017 Jun 5.
Zhang Y, Poorman ME, Grissom WA. Dual-echo Z-shimmed proton resonance frequency-shift magnetic resonance thermometry near metallic ablation probes: Technique and temperature precision. Magn Reson Med. 2017 Feb 10. doi: 10.1002/mrm.26634. [Epub ahead of print
Schilling KG, Nath V, Blaber JA, Parvathaneni P, Anderson AW, Landman BA Empirical consideration of the effects of acquisition parameters and analysis model on clinically feasible q-ball imaging. Magn Reson Imaging. 2017 Apr 24;40:62-74. doi: 10.1016/j.mri.2017.04.007. [Epub ahead of print]
Morgan VL, Englot DJ, Rogers BP, Landman BA, Cakir A, Abou-Khalil BW, Anderson AW Magnetic resonance imaging connectivity for the prediction of seizure outcome in temporal lobe epilepsy. Epilepsia. 2017 Apr 27. doi: 10.1111/epi.13762. [Epub ahead of print]
Swaney PJ, York PA, Gilbert HB, Burgner-Kahrs J, Webster RJ 3rd Design, Fabrication, and Testing of a Needle-Sized Wrist for Surgical Instruments. J Med Device. 2017 Mar;11(1):0145011-145019. doi: 10.1115/1.4034575. Epub 2016 Dec 21
Wellborn PS, Dillon NP, Russell PT, Webster RJ 3rd Coffee: the key to safer image-guided surgery-a granular jamming cap for non-invasive, rigid fixation of fiducial markers to the patient. Int J Comput Assist Radiol Surg. 2017 Mar 30. doi: 10.1007/s11548-017-1569-6. [Epub ahead of print]
Dillon NP, Fichera L, Kesler K, Zuniga MG, Mitchell JE, Webster RJ 3rd, Labadie RF Pre-operative Screening and Manual Drilling Strategies to Reduce the Risk of Thermal Injury During Minimally Invasive Cochlear Implantation Surgery. Ann Biomed Eng. 2017 May 18. doi: 10.1007/s10439-017-1854-0. [Epub ahead of print]
Griesenauer RH, Weis JA, Arlinghaus LR, Meszoely IM, Miga MI. Breast tissue stiffness estimation for surgical guidance using gravity-induced excitation. Phys Med Biol. 2017 May 18;62(12):4756-4776. doi: 10.1088/1361-6560/aa700a. [Epub ahead of print]
van Wouwe NC, Pallavaram S, Phibbs FT, Martinez-Ramirez D, Neimat JS, Dawant BM, D'Haese PF, Kanoff KE, van den Wildenberg WPM, Okun MS, Wylie SA. Focused stimulation of dorsal subthalamic nucleus improves reactive inhibitory control of action impulses Neuropsychologia. 2017 Feb 22;99:37-47. doi: 10.1016/j.neuropsychologia.2017.02.016. [Epub ahead of print]
Raudaschl PF, Zaffino P, Sharp GC, Spadea MF, Chen A, Dawant BM, Albrecht T, Gass T, Langguth C, Lüthi M, Jung F, Knapp O, Wesarg S, Mannion-Haworth R, Bowes M, Ashman A, Guillard G, Brett A, Vincent G, Orbes-Arteaga M, Cárdenas-Peña D, Castellanos-Dominguez G, Aghdasi N, Li Y, Berens A, Moe K, Hannaford B, Schubert R, Fritscher KD. Evaluation of Segmentation Methods on Head and Neck CT: Auto-Segmentation Challenge 2015 Med Phys. 2017 Mar 8. doi: 10.1002/mp.12197. [Epub ahead of print]
Gao Y, Schilling KG, Stepniewska I, Plassard AJ, Choe AS, Li X, Landman BA, Anderson AW Tests of cortical parcellation based on white matter connectivity using diffusion tensor imaging Neuroimage. 2017 Feb 22. pii: S1053-8119(17)30159-3. doi: 10.1016/j.neuroimage.2017.02.048. [Epub ahead of print]
Collins J, Weis J, Heiselman J, Clements L, Simpson A, Jarnagin W, Miga M. Improving registration robustness for image-guided liver surgery in a novel human-to-phantom data framework. IEEE Trans Med Imaging. 2017 Feb 13. doi: 10.1109/TMI.2017.2668842. [Epub ahead of print]
Hormuth DA 2nd, Weis JA, Barnes SL, Miga MI, Rericha EC, Quaranta V, Yankeelov TE A mechanically coupled reaction-diffusion model that incorporates intra-tumoural heterogeneity to predict in vivo glioma growth J R Soc Interface. 2017 Mar;14(128). pii: 20161010. doi: 10.1098/rsif.2016.1010.
Vijayan RC, Thompson RC, Chambless LB, Morone PJ, He L, Clements LW, Griesenauer RH, Kang H, Miga MI Android application for determining surgical variables in brain-tumor resection procedures J Med Imaging (Bellingham). 2017 Jan;4(1):015003. doi: 10.1117/1.JMI.4.1.015003. Epub 2017 Mar 2.
Rivas A, Cakir A, Hunter JB, Labadie RF, Zuniga MG, Wanna GB, Dawant BM, Noble JH Automatic Cochlear Duct Length Estimation for Selection of Cochlear Implant Electrode Arrays Otol Neurotol. 2017 Mar
O'Connell BP, Hunter JB, Haynes DS, Holder JT, Dedmon MM, Noble JH, Dawant BM, Wanna GB. Insertion depth impacts speech perception and hearing preservation for lateral wall electrodes Laryngoscope. 2017 Mar 17. doi: 10.1002/lary.26467. [Epub ahead of print]
Wang J, Dawant BM, Labadie RF, Noble JH. Retrospective Evaluation of a Technique for Patient-Customized Placement of Precurved Cochlear Implant Electrode Arrays Otolaryngol Head Neck Surg. 2017 Mar 1:194599817697298. doi: 10.1177/0194599817697298. [Epub ahead of print]
McRackan TR, Noble JH, Wilkinson EP, Mills D, Dietrich MS, Dawant BM, Gifford RH, Labadie RF Implementation of Image-Guided Cochlear Implant Programming at a Distant Site Otolaryngol Head Neck Surg. 2017 Mar 1:194599817698435. doi: 10.1177/0194599817698435. [Epub ahead of print]
Dillon NP, Balachandran R, Siebold MA, Webster RJ 3rd, Wanna GB, Labadie RF. Cadaveric Testing of Robot-Assisted Access to the Internal Auditory Canal for Vestibular Schwannoma Removal. Otol Neurotol. 2017 Jan 10. [Epub ahead of print]
Yasin R, O'Connell BP, Yu H, Hunter JB, Wanna GB, Rivas A, Simaan N. Steerable Robot-assisted Micromanipulation in the Middle Ear: Preliminary Feasibility Evaluation. Otol Neurotol. 2017 Feb;38(2):290-295.
Weis JA, Miga MI, Yankeelov TE. Three-dimensional Image-based Mechanical Modeling for Predicting the Response of Breast Cancer to Neoadjuvant Therapy. Comput Methods Appl Mech Eng. 2017 Feb
Zuniga MG, Rivas A, Hedley-Williams A, Gifford RH, Dwyer R, Dawant BM, Sunderhaus LW, Hovis KL, Wanna GB, Noble JH, Labadie RF. Tip Fold-over in Cochlear Implantation: Case Series. Otol Neurotol. 2017 Feb;38(2):199-206.
2016
Malone JD, El-Haddad MT, Bozic I, Tye LA, Majeau L, Godbout N, Rollins AM, Boudoux C, Joos KM, Patel SN, Tao YK. Simultaneous multimodal ophthalmic imaging using swept-source spectrally encoded scanning laser ophthalmoscopy and optical coherence tomography. Biomed Opt Express. 2016 Dec 12;8(1):193-206. doi: 10.1364/BOE.8.000193. eCollection 2017 Jan 1.
Xu Z, Conrad BN, Baucom RB, Smith SA, Poulose BK, Landman BA. Abdomen and spinal cord segmentation with augmented active shape models. J Med Imaging (Bellingham). 2016 Jul;3(3):036002.
Zhao Y, Dawant BM, Noble JH. Automatic selection of the active electrode set for image-guided cochlear implant programming. J Med Imaging (Bellingham). 2016 Jul
Pile J, Sweeney AD, Kumar S, Simaan N, Wanna GB. Detection of modiolar proximity through bipolar impedance measurements. Laryngoscope. 2016 Aug 24. doi: 10.1002/lary.26183. [Epub ahead of print]
Yankeelov TE, Miga MI. Introduction to the Special Section on Clinical Applications of Multi-Scale Modeling. Ann Biomed Eng. 2016 Sep
Hunter JB, O'Connell BP, Wang J, Chakravorti S, Makowiec K, Carlson ML, Dawant B, McCaslin DL, Noble JH, Wanna GB. Correlation of Superior Canal Dehiscence Surface Area With Vestibular Evoked Myogenic Potentials, Audiometric Thresholds, and Dizziness Handicap. Otol Neurotol. 2016 Sep
Byram B, Shu J. Pseudononlinear ultrasound simulation approach for reverberation clutter. J Med Imaging (Bellingham). 2016 Oct
Xu Z, Gertz AL, Burke RP, Bansal N, Kang H, Landman BA, Abramson RG. Improving Spleen Volume Estimation Via Computer-assisted Segmentation on Clinically Acquired CT Scans. Acad Radiol. 2016 Oct
Claassen DO, McDonell KE, Donahue M, Rawal S, Wylie SA, Neimat JS, Kang H, Hedera P, Zald D, Landman B, Dawant B, Rane S. Cortical asymmetry in Parkinson's disease: early susceptibility of the left hemisphere. Brain Behav. 2016 Oct 6
Wu C, D'Haese PF, Pallavaram S, Dawant BM, Konrad P, Sharan AD. Variations in Thalamic Anatomy Affect Targeting in Deep Brain Stimulation for Epilepsy. Stereotact Funct Neurosurg. 2016 Nov 16;94(6):387-396. [Epub ahead of print]
Whisenant JG, Dortch RD, Grissom W, Kang H, Arlinghaus LR, Yankeelov TE. Bloch-Siegert B1-Mapping Improves Accuracy and Precision of Longitudinal Relaxation Measurements in the Breast at 3 T. Tomography. 2016 Dec;2(4):250-259.
Cakir A, Labadie RF, Zuniga MG, Dawant BM, Noble JH. Evaluation of Rigid Cochlear Models for Measuring Cochlear Implant Electrode Position. Otol Neurotol. 2016 Dec
Laborde CJ, Bell CS, Slaughter JC, Valdastri P, Obstein KL Evaluation of a novel tablet application for improvement in colonoscopy training and mentoring (with video) Gastrointest Endosc. 2016 Jul 29. pii: S0016-5107(16)30437-0. doi: 10.1016/j.gie.2016.07.052. [Epub ahead of print]
Claassen DO, Dobolyi DG, Isaacs DA, Roman OC, Herb J, Wylie SA, Neimat JS, Donahue MJ, Hedera P, Zald DH, Landman BA, Bowman AB, Dawant BM, Rane S Linear and Curvilinear Trajectories of Cortical Loss with Advancing Age and Disease Duration in Parkinson's Disease Aging Dis. 2016 May 27;7(3):220-9. doi: 10.14336/AD.2015.1110. eCollection 2016 May
O'Connell BP, Cakir A, Hunter JB, Francis DO, Noble JH, Labadie RF, Zuniga G, Dawant BM, Rivas A, Wanna GB Electrode Location and Angular Insertion Depth Are Predictors of Audiologic Outcomes in Cochlear Implantation Otol Neurotol. 2016 Jun 23. [Epub ahead of print]
Seltz LM, Herrell SD. Applications of spectroscopy in diagnosis, staging, and treatment of urologic malignancies. Curr Opin Urol. 2016 May;26(3):259-63. doi: 10.1097/MOU.0000000000000281.
Bennett ML, Sweeney AD, Haynes DS, Dietrich MS, Fang N, Labadie RF. The Utility of a Predictive Model for Cochlear Implant Operating Time. Otol Neurotol. 2016 Feb;37(2):e104-9. doi: 10.1097/MAO.0000000000000930.
Yan X, Cao Z, Grissom WA. Experimental implementation of array-compressed parallel transmission at 7 tesla. Magn Reson Med. 2016 Jun;75(6):2545-52. doi: 10.1002/mrm.26239. Epub 2016 Apr 15.
Bennett ML, Zhang D, Labadie RF, Noble JH. Comparison of Middle Ear Visualization With Endoscopy and Microscopy. Otol Neurotol. 2016 Apr;37(4):362-6. doi: 10.1097/MAO.0000000000000988.
Dumont DM, Walsh KM, Byram BC. Improving Displacement Signal-to-Noise Ratio for Low-Signal Radiation Force Elasticity Imaging Using Bayesian Techniques. Ultrasound Med Biol. 2016 May 3. pii: S0301-5629(16)00117-4. doi: 10.1016/j.ultrasmedbio.2016.03.004. [Epub ahead of print]
Lakomkin N, Kang H, Landman B, Hutson MS, Abramson RG. The Attenuation Distribution Across the Long Axis (ADLA): Preliminary Findings for Assessing Response to Cancer Treatment. Acad Radiol. 2016 Jun;23(6):718-23. doi: 10.1016/j.acra.2016.02.007. Epub 2016 Apr 1.
Huo Y, Plassard AJ, Carass A, Resnick SM, Pham DL, Prince JL, Landman BA. Consistent cortical reconstruction and multi-atlas brain segmentation. Neuroimage. 2016 May 13. pii: S1053-8119(16)30150-1. doi: 10.1016/j.neuroimage.2016.05.030. [Epub ahead of print
By S, Smith AK, Dethrage LM, Lyttle BD, Landman BA, Creasy JL, Pawate S, Smith SA. Quantifying the impact of underlying measurement error on cervical spinal cord diffusion tensor imaging at 3T. J Magn Reson Imaging. 2016 May 18. doi: 10.1002/jmri.25308. [Epub ahead of print]
Leong F, Garbin N, Di Natali C, Mohammadi A, Thiruchelvam D, Oetomo D, Valdastri P. Magnetic Surgical Instruments for Robotic Abdominal Surgery. IEEE Rev Biomed Eng. 2016 Jan 26. [Epub ahead of print]
Di Natali C, Beccani M, Simaan N, Valdastri P. Jacobian-Based Iterative Method for Magnetic Localization in Robotic Capsule Endoscopy. IEEE Trans Robot. 2016 Apr;32(2):327-338. Epub 2016 Mar 10.
Herb JN, Rane S, Isaacs DA, Van Wouwe N, Roman OC, Landman BA, Dawant BM, Hedera P, Zald DH, Neimat JS, Wylie SA, Donahue MJ, Claassen DO. Cortical Implications of Advancing Age and Disease Duration in Parkinson's Disease Patients with Postural Instability and Gait Dysfunction. J Parkinsons Dis. 2016 May 5;6(2):441-51. doi: 10.3233/JPD-150753.
Clements LW, Collins JA, Weis JA, Simpson AL, Adams LB, Jarnagin WR, Miga MI Evaluation of model-based deformation correction in image-guided liver surgery via tracked intraoperative ultrasound. J Med Imaging (Bellingham). 2016 Jan;3(1):015003. doi: 10.1117/1.JMI.3.1.015003. Epub 2016 Mar 23.
Mitchell CR, Hendrick R, Webster Iii RJ, Herrell D. Towards Improving Transurethral Prostate Surgery: Development and Initial Experiments with a Prototype Concentric Tube Robotic Platform. J Endourol. 2016 Mar 17. [Epub ahead of print]
Sweeney AD, Hunter JB, Carlson ML, Rivas A, Bennett ML, Gifford RH, Noble JH, Haynes DS, Labadie RF, Wanna GB. Durability of Hearing Preservation after Cochlear Implantation with Conventional-Length Electrodes and Scala Tympani Insertion. Otolaryngol Head Neck Surg. 2016 Feb 23. pii: 0194599816630545.
Tian Q, Resnick SM, Landman BA, Huo Y, Venkatraman VK, Gonzalez CE, Simonsick EM, Shardell MD, Ferrucci L, Studenski. Lower gray matter integrity is associated with greater lap time variation in high-functioning older adults. Exp Gerontol. 2016 May;77:46-51.
Gilbert HB, Hendrick RJ, Webster RJ 3rd. Elastic Stability of Concentric Tube Robots: A Stability Measure and Design Test. IEEE Trans Robot. 2016 Feb;32(1):20-35.
Kassab GS, An G, Sander EA, Miga MI, Guccione JM, Ji S, Vodovotz Y Augmenting Surgery via Multi-scale Modeling and Translational Systems Biology in the Era of Precision Medicine: A Multidisciplinary Perspective. Ann Biomed Eng. 2016 Mar 25.
Abramson RG, Arlinghaus LR, Dula AN, Quarles CC, Stokes AM, Weis JA, Whisenant JG, Chekmenev EY, Zhukov I, Williams JM, Yankeelov TE. MR Imaging Biomarkers in Oncology Clinical Trials. Magn Reson Imaging Clin N Am. 2016 Feb;24(1):11-29.[Epub ahead of print]
Tam AL, Lim HJ, Wistuba II, Tamrazi A, Kuo MD, Ziv E, Wong S, Shih AJ, Webster RJ 3rd, Fischer GS, Nagrath S, Davis SE, White SB, Ahrar K. Image-Guided Biopsy in the Era of Personalized Cancer Care: Proceedings from the Society of Interventional Radiology Research Consensus Panel. J Vasc Interv Radiol. 2016 Jan;27(1):8-19.
Labadie RF, Noble JH, Hedley-Williams AJ, Sunderhaus LW, Dawant BM, Gifford RH.Results of Postoperative, CT-based, Electrode Deactivation on Hearing in Prelingually Deafened Adult Cochlear Implant Recipients. Otol Neurotol. 2016 Feb;37(2):137-45
Travaglini TA, Swaney PJ, Weaver KD, Webster RJ 3rd.Initial Experiments with the Leap Motion as a User Interface in Robotic Endonasal Surgery. Robot Mechatron. 2016;37:171-179.
Noble JH, Hedley-Williams AJ, Sunderhaus L, Dawant BM, Labadie RF, Camarata SM, Gifford RH. Initial Results With Image-guided Cochlear Implant Programming in Children. Otol Neurotol. 2016 Feb;37(2):e63-9.
Ong R, Glisson CL, Burgner-Kahrs J, Simpson A, Danilchenko A, Lathrop R, Herrell SD, Webster RJ 3rd, Miga M, Galloway RL. A Novel Method for Texture-mapping Conoscopic Surfaces for Minimally Invasive Image-guided Kidney Surgery. Int J Comput Assist Radiol Surg. 2016 Jan 13
Schilling K, Janve V, Gao Y, Stepniewska I, Landman BA, Anderson AW. Comparison of 3D Orientation Distribution Functions Measured with Confocal Microscopy and Diffusion MRI. Neuroimage. 2016 Jan 21;129:185-197.
Anderson PL, Lathrop RA, Webster Iii RJ. Robot-Like Dexterity Without Computers and Motors: A Review of Hand-Held Laparoscopic Instruments with Wrist-Like Tip Articulation. Expert Rev Med Devices. 2016 Jan 25.
Dumont DM, Byram BC.Robust Tracking of Small Displacements With a Bayesian Estimator. IEEE Trans Ultrason Ferroelectr Freq Control. 2016 Jan;63(1):20-34. Epub 2015 Oct 27.
Miga MI.Computational Modeling for Enhancing Soft Tissue Image Guided Surgery: An Application in Neurosurgery.Ann Biomed Eng. 2016 Jan;44(1):128-38. doi: 10.1007/s10439-015-1433-1. Epub 2015 Sep 9.
Harrigan RL, Yvernault BC, Boyd BD, Damon SM, Gibney KD, Conrad BN, Phillips NS, Rogers BP, Gao Y, Landman BA. Vanderbilt University Institute of Imaging Science Center for Computational Imaging XNAT: A multimodal data archive and processing environment. Neuroimage. 2016 Jan 1;124(Pt B):1097-101. doi: 10.1016/j.neuroimage.2015.05.021. Epub 2015 May 16.
Davis TJ, Zhang D, Gifford RH, Dawant BM, Labadie RF, Noble JH.Relationship Between Electrode-to-Modiolus Distance and Current Levels for Adults With Cochlear Implants. Otol Neurotol. 2016 Jan;37(1):31-37.
2015
Xu Z, Asman AJ, Baucom RB, Abramson RG, Poulose BK, Landman BA. Quantitative CT Imaging of Ventral Hernias: Preliminary Validation of an Anatomical Labeling Protocol. PLoS One. 2015 Oct 28;10(10)
Kuntz A, Torres LG, Feins RH, Webster RJ 3rd, Alterovitz R. Motion Planning for a Three-Stage Multilumen Transoral Lung Access System. Rep U S. 2015 Sep-Oct;2015:3255-3261.
Boronyak SM, Fredi JL, Young MN, Dumont DM, Williams PE, Byram BC, Merryman WD. Quantitative Imaging Assessment of an Alternative Approach to Surgical Mitral Valve Leaflet Resection: An Acute Porcine Study. Ann Biomed Eng. 2015 Oct 27.
Byram B, Dei K, Tierney J, Dumont D.A Model and Regularization Scheme for Ultrasonic Beamforming Clutter Reduction. IEEE Trans Ultrason Ferroelectr Freq Control. 2015 Nov;62(11):1913-27.
Pheiffer TS, Miga MI. Toward a Generic Real-time Compression Correction Framework for Tracked Ultrasound. Int J Comput Assist Radiol Surg. 2015 Nov;10(11):1777-92.
Hormuth DA 2nd, Weis JA, Barnes SL, Miga MI, Rericha EC, Quaranta V, Yankeelov TE. Predicting In vivo Glioma Growth with the Reaction Diffusion Equation Constrained by Quantitative Magnetic Resonance Imaging Data. Phys Biol. 2015 Jun 4;12(4):046006.
Conley RH, Meszoely IM, Weis JA, Pheiffer TS, Arlinghaus LR, Yankeelov TE, Miga MI. Realization of a Biomechanical Model-assisted Image Guidance System for Breast Cancer Surgery using Supine MRI. Int J Comput Assist Radiol Surg. 2015 Dec;10(12):1985-96.
Weis JA, Flint KM, Sanchez V, Yankeelov TE, Miga MI. Assessing the Accuracy and Reproducibility of Modality Independent Elastography in a Murine Model of Breast Cancer. J Med Imaging (Bellingham). 2015 Jul;2(3):036001.
Weis JA, Miga MI, Arlinghaus LR, Li X, Abramson V, Chakravarthy AB, Pendyala P, Yankeelov TE. Predicting the Response of Breast Cancer to Neoadjuvant Therapy Using a Mechanically Coupled Reaction-Diffusion Model. Cancer Res. 2015 Nov 15;75(22):4697-707.
Miga MI, Sun K, Chen I, Clements LW, Pheiffer TS, Simpson AL, Thompson RC. Clinical Evaluation of a Model-updated Image-guidance Approach to Brain Shift Compensation: Experience in 16 cases. Int J Comput Assist Radiol Surg. 2015 Oct 17.
Harrigan RL, Plassard AJ, Bryan FW, Caires G, Mawn LA, Dethrage LM, Pawate S, Galloway RL, Smith SA, Landman BA. Disambiguating the Optic Nerve from the Surrounding Cerebrospinal Fluid: Application to MS-related Atrophy. Magn Reson Med. 2015 Mar 7.
Sojkova J, Goh J, Bilgel M, Landman B, Yang X, Zhou Y, An Y, Beason-Held LL, Kraut MA, Wong DF, Resnick SM. Voxelwise Relationships Between Distribution Volume Ratio and Cerebral Blood Flow: Implications for Analysis of β-Amyloid Images. J Nucl Med. 2015 Jul;56(7):1042-7.
Xu Z, Burke RP, Lee CP, Baucom RB, Poulose BK, Abramson RG, Landman BA. Efficient Multi-atlas Abdominal Segmentation on Clinically Acquired CT with SIMPLE Context Learning. Med Image Anal. 2015 Aug;24(1):18-27.
Venkatraman VK, Gonzalez CE, Landman B, Goh J, Reiter DA, An Y, Resnick SM. Region of Interest Correction Factors Improve Reliability of Diffusion Imaging Measures Within and Across Scanners and Field Strengths. Neuroimage. 2015 Oct 1;119:406-16.
Asman AJ, Huo Y, Plassard AJ, Landman BA. Multi-atlas Learner Fusion: An Efficient Segmentation Approach for Large-Scale Data. Med Image Anal. 2015 Dec;26(1):82-91.
Yu H, Shen JH, Shah RJ, Simaan N, Joos KM. Evaluation of Microsurgical Tasks with OCT-Guided and/or Robot-Assisted Ophthalmic Forceps. Biomed Opt Express. 2015 Jan 9;6(2):457-72.
H. B. Gilbert, J. Neimat, and R. J. Webster III, “Concentric Tube Robots as Steerable Needles: Achieving Follow-The-Leader Deployment”, IEEE Transactions on Robotics. 2015; 31 (2):246-258.
Godage, R. Wirz, I. D. Walker, and R. J. Webster, III, “Accurate and Efficient Dynamics for Variable Length Continuum Arms: A Center of Gravity Approach”, Soft Robotics. 2015; 2(3).
Dillon NP, Balachandran R, Fitzpatrick JM, Siebold MA, Labadie RF, Wanna GB, Withrow TJ, Webster RJ 3rd. A Compact, Bone-Attached Robot for Mastoidectomy. J Med Device. 2015 Sep;9(3):0310031-310037.
Dillon NP, Balachandran R, Labadie RF.Accuracy of Linear Drilling in Temporal Bone Using Drill Press System for Minimally Invasive Cochlear Implantation. Int J Comput Assist Radiol Surg. 2015 Jul 17. [Epub ahead of print]
Xu Z, Asman AJ, Baucom RB, Abramson RG, Poulose BK, Landman BA Quantitative CT Imaging of Ventral Hernias: Preliminary Validation of an Anatomical Labeling Protocol. PLoS One. 2015 Oct 28;10(10):e0141671. doi: 10.1371/journal.pone.0141671. eCollection 2015.
Slawinski PR, Obstein KL, Valdastri P. Emerging Issues and Future Developments in Capsule Endoscopy. Tech Gastrointest Endosc. 2015 Jan 1;17(1):40-46.
Slawinski PR, Obstein KL, Valdastri P. Capsule Endoscopy of the Future: What's on the Horizon? World J Gastroenterol. 2015 Oct 7;21(37):10528-41. doi: 10.3748/wjg.v21.i37.10528. Review.
J. Swaney, H. B. Gilbert, R. J. Webster III, P. T. Russell III, and K. D. Weaver, “Endonasal Skull Base Tumor Removal Using Concentric Tube Continuum Robots: A Phantom Study”, Journal of Neurological Surgery Part B: Skull Base, 2015: 76(2): 145-149.
D'Haese PF, Konrad PE, Pallavaram S, Li R, Prassad P, Rodriguez W, Dawant BM. CranialCloud: a Cloud-based Architecture to Support Trans-institutional Collaborative Efforts in Neurodegenerative Disorders. Int J Comput Assist Radiol Surg. 2015 Jun;10(6):815-23. doi: 10.1007/s11548-015-1189-y. Epub 2015 Apr 11.
Liu Y, Dawant BM. Automatic Localization of the Anterior Commissure, Posterior Commissure, and Midsagittal Plane in MRI Scans Using Regression Forests. IEEE J Biomed Health Inform. 2015 Jul;19(4):1362-74. doi: 10.1109/JBHI.2015.2428672. Epub 2015 Apr 30.
Pallavaram S, DʼHaese PF, Lake W, Konrad PE, Dawant BM, Neimat JS. Fully Automated Targeting Using Nonrigid Image Registration Matches Accuracy and Exceeds Precision of Best Manual Approaches to Subthalamic Deep Brain Stimulation Targeting in Parkinson Disease.Neurosurgery. 2015 Jun;76(6):756-65. doi: 10.1227/NEU.0000000000000714.
Wanna GB, Noble JH, Gifford RH, Dietrich MS, Sweeney AD, Zhang D, Dawant BM, Rivas A, Labadie RF.Impact of Intrascalar Electrode Location, Electrode Type, and Angular Insertion Depth on Residual Hearing in Cochlear Implant Patients: Preliminary Results. Otol Neurotol. 2015 Sep;36(8):1343-8. doi: 10.1097/MAO.0000000000000829.
Wirz R, Torres L, Swaney P, Gilbert H, Alterovitz R, Webster RJ 3rd, Weaver KD, Russell PT 3rd. An Experimental Feasibility Study on Robotic Endonasal Telesurgery. Neurosurgery. 2015 Jan 16.
Sheffield SW, Haynes DS, Wanna GB, Labadie RF, Gifford RH. Availability of Binaural Cues for Pediatric Bilateral Cochlear Implant Recipients. J Am Acad Audiol. 2015 Mar;26(3):289-98.
Harrigan RL, Plassard AJ, Bryan FW, Caires G, Mawn LA, Dethrage LM, Pawate S, Galloway RL, Smith SA, Landman BA. Disambiguating the Optic Nerve from the Surrounding Cerebrospinal Fluid: Application to MS-related Atrophy. Magn Reson Med. 2015 Mar 7
Tolleson C, Pallavaram S, Li C, Fang J, Phibbs F, Konrad P, Hedera P, D'Haese PF, Dawant BM, Davis TL. The Optimal Pallidal Target in Deep Brain Stimulation for Dystonia: A Study Using a Functional Atlas Based on Nonlinear Image Registration. Stereotact Funct Neurosurg. 2015;93(1):17-24.
Kumar AN, Miga MI, Pheiffer TS, Chambless LB, Thompson RC, Dawant BM. Persistent and Automatic Intraoperative 3D Digitization of Surfaces under Dynamic Magnifications of an Operating Microscope. Med Image Anal. 2015 Jan;19(1):30-45.
Simpson AL, Adams LB, Allen PJ, D'Angelica MI, DeMatteo RP, Fong Y, Kingham TP, Leung U, Miga MI, Parada EP, Jarnagin WR, Do RK. Texture Analysis of Preoperative CT Images for Prediction of Postoperative Hepatic Insufficiency: A Preliminary Study. J Am Coll Surg. 2015 Mar;220(3):339-46.
Simpson AL, Leal JN, Pugalenthi A, Allen PJ, DeMatteo RP, Fong Y, Gönen M, Jarnagin WR, Kingham TP, Miga MI, Shia J, Weiser MR, D'Angelica MI. Chemotherapy-Induced Splenic Volume Increase is Independently Associated with Major Complications after Hepatic Resection for Metastatic Colorectal Cancer. J Am Coll Surg. 2015 Mar;220(3):271-80.
Pickens RB, Bajo A, Simaan N, Herrell D. A Pilot Ex Vivo Evaluation of a Telerobotic System for Transurethral Intervention and Surveillance. J Endourol. 2015 Feb;29(2):231-4.
Groom K, Wang L, Simaan N, Netterville J. Robot-Assisted Transnasal Laryngoplasty in Cadaveric Models: Quantifying Forces and Identifying Challenges. Laryngoscope. 2015 Feb 3.
Caprara RJ, Obstein KL, Scozzarro G, Di Natali C, Beccani M, Morgan DR, Valdastri P. A Platform for Gastric Cancer Screening in Low- and Middle-Income Countries. IEEE Trans Biomed Eng. IEEE Trans Biomed Eng. 2015 May;62(5):1324-32.
2014
Sun K, Pheiffer TS, Simpson AL, Weis JA, Thompson RC, Miga MI. Near Real-Time Computer Assisted Surgery for Brain Shift Correction Using Biomechanical Models. IEEE J Transl Eng Health Med. 2014 Apr 30;2.
B. Comber, E. J. Barth, and R. J. Webster III, “Design and Control of an Magnetic Resonance Compatible Precision Pneumatic Active Cannula Robot”, ASME Journal of Medical Devices. 2014. 8(1): 011003.
Xu Z, Li B, Panda S, Asman AJ, Merkle KL, Shanahan PL, Abramson RG, Landman BA. Shape-Constrained Multi-Atlas Segmentation of Spleen in CT. Proc Soc Photo Opt Instrum Eng. 2014 Mar 21;9034:903446.
Asman AJ, Dagley AS, Landman BA. Statistical Label Fusion with Hierarchical Performance Models. Proc Soc Photo Opt Instrum Eng. 2014 Mar 21;9034:90341E.
Ritch CR, You C, May AT, Herrell SD, Clark PE, Penson DF, Chang SS, Cookson MS, Smith JA Jr, Barocas DA. Biochemical Recurrence-free Survival After Robotic-assisted Laparoscopic vs Open Radical Prostatectomy for Intermediate- and High-risk Prostate Cancer. Urology. 2014 Jun;83(6):1309-15.
Mitchell CR, Herrell SD. Image-guided Surgery and Emerging Molecular Imaging: Advances to Complement Minimally Invasive Surgery. Urol Clin North Am. 2014 Nov;41(4):567-80.
Benson AD, Juliano TM, Viprakasit DP, Herrell SD. Microlaparoscopy Versus Conventional Laparoscopy in Transperitoneal Pyeloplasty. J Endourol. 2014 Dec;28(12):1404-8.
Patil S, Burgner J, Webster RJ 3rd, Alterovitz R. Needle Steering in 3-D Via Rapid Replanning. IEEE Trans Robot. 2014 Aug;30(4):853-864.
Dillon NP, Balachandran R, Dit Falisse AM, Wanna GB, Labadie RF, Withrow TJ, Fitzpatrick JM, Webster RJ 3rd. Preliminary Testing of a Compact, Bone-Attached Robot for Otologic Surgery. Proc Soc Photo Opt Instrum Eng. 2014 Mar 12;9036:903614.
Panda S, Asman AJ, Khare SP, Thompson L, Mawn LA, Smith SA, Landman BA. Evaluation of Multi-Atlas Label Fusion for In Vivo MRI Orbital Segmentation. J Med Imaging (Bellingham). 2014 Jul 18;1(2).
Panda S, Asman AJ, Delisi MP, Mawn LA, Galloway RL, Landman BA. Robust Optic Nerve Segmentation on Clinically Acquired CT. Proc Soc Photo Opt Instrum Eng. 2014 Mar 21;9034:90341G.
Wanna GB, Noble JH, Carlson ML, Gifford RH, Dietrich MS, Haynes DS, Dawant BM, Labadie RF. Impact of Electrode Design and Surgical Approach on Scalar Location and Cochlear Implant Outcomes. Laryngoscope. 2014 Nov; 124 Suppl 6:S1-7.
Banalagay R, Covington KJ, Wilkes DM, Landman BA. Resource Estimation in High Performance Medical Image Computing. Neuroinformatics. 2014 Oct;12(4):563-73.
DeLisi MP, Mawn LA, Galloway RL Jr. Image-guided Transorbital Procedures with Endoscopic Video Augmentation. Med Phys. 2014 Sep;41(9):091901.
DeLisi MP, Mawn LA, Galloway RL Jr. Transorbital Target Localization with Augmented Ophthalmologic Surgical Endoscopy. Int J Comput Assist Radiol Surg. 2014 Sep 12.
Asman AJ, Landman BA. Hierarchical Performance Estimation in the Statistical Label Fusion Framework. Med Image Anal. 2014 Oct;18(7):1070-81.
Pheiffer TS, Thompson RC, Rucker DC, Simpson AL, Miga MI. Model-based Correction of Tissue Compression for Tracked Ultrasound in Soft Tissue Image-guided Surgery. Ultrasound Med Biol. 2014 Apr;40(4):788-803.
Simpson AL, Geller DA, Hemming AW, Jarnagin WR, Clements LW, D'Angelica MI, Dumpuri P, Gönen M, Zendejas I, Miga MI, Stefansic JD. Liver Planning Software Accurately Predicts Postoperative Liver Volume and Measures Early Regeneration. J Am Coll Surg. 2014 Aug;219(2):199-207.
Byram B, Kim H, Van Assche L, Wolf PD, Trahey GE. The Feasibility of Myocardial Infarct Visualization Using Atrial Kick Induced Strain (AKIS) Contrast. Ultrasound Med Biol. 2014 Jun;40(6):1104-17.
Zhao Y, Dawant BM, Labadie RF, Noble JH. Automatic Localization of Cochlear Implant Electrodes in CT. Med Image Comput Comput Assist Interv. 2014;17(Pt 1):331-8.
Noble JH, Gifford RH, Hedley-Williams AJ, Dawant BM, Labadie RF. Clinical Evaluation of an Image-Guided Cochlear Implant Programming Strategy. Audiol Neurootol. 2014 Nov 7;19(6):400-411.
Xu Z, Asman AJ, Shanahan PL, Abramson RG, Landman BA. SIMPLE is a Good Idea (and Better with Context Learning). Med Image Comput Comput Assist Interv. 2014;17(Pt 1):364-71.
Reda FA, Noble JH, Labadie RF, Dawant BM. An Artifact-Robust, Shape Library-Based Algorithm for Automatic Segmentation of Inner Ear Anatomy in Post-Cochlear-Implantation CT. Proc Soc Photo Opt Instrum Eng. 2014 Mar 21;9034:90342V.
Datteri R, Liu Y, D'Haese PF, Dawant B. Validation of a Non-Rigid Registration Error Detection Algorithm using Clinical MRI Brain Data. IEEE Trans Med Imaging. 2014 Jul 30.
Phibbs FT, Pallavaram S, Tolleson C, D'Haese PF, Dawant BM. Use of Efficacy Probability Maps for the Post-Operative Programming of Deep Brain Stimulation in Essential Tremor. Parkinsonism Relat Disord. 2014 Sep 16.
Banalagay R, Covington KJ, Wilkes DM, Landman BA. Resource Estimation in High Performance Medical Image Computing. Neuroinformatics. 2014 Oct;12(4):563-73.
Yvernault BC, Theobald CD Jr, Smith JC, Villalta V, Zald DH, Landman BA. Validating DICOM Transcoding with an Open Multi-Format Resource. Neuroinformatics. 2014 Oct;12(4):615-7.
McRackan TR, Fang TY, Pelosi S, Rivas A, Dietrich MS, Wanna GB, Labadie RF, Haynes DS, Bennett ML. Factors associated with recurrence of squamous cell carcinoma involving the temporal bone. Ann Otol Rhinol Laryngol. 2014 Apr;123(4):235-9.
McRackan TR, Best J, Pearce EC, Bennett ML, Dietrich M, Wanna GB, Haynes DS, Labadie RF. Intratympanic Dexamethasone as a Symptomatic Treatment for Ménière's Disease. Otol Neurotol. 2014 Oct;35(9):1638-40.
Ciuti G, Nardi M, Valdastri P, Menciassi A, Basile Fasolo C, Dario P. HuMOVE: A Low-invasive Wearable Monitoring Platform in Sexual Medicine. Urology. 2014 Oct;84(4):976-81.
Jakovljevic M, Byram BC, Hyun D, Dahl JJ, Trahey GE. Short-lag spatial coherence imaging on matrix arrays, part II: Phantom and in vivo experiments. IEEE Trans Ultrason Ferroelectr Freq Control. 2014 Jul;61(7):1113-22.
Kochunov P, Jahanshad N, Sprooten E, Nichols TE, Mandl RC, Almasy L, Booth T, Brouwer RM, Curran JE, de Zubicaray GI, Dimitrova R, Duggirala R, Fox PT, Elliot Hong L, Landman BA, Lemaitre H, Lopez LM, Martin NG, McMahon KL, Mitchell BD, Olvera RL, Peterson CP, Starr JM, Sussmann JE, Toga AW, Wardlaw JM, Wright MJ, Wright SN, Bastin ME, McIntosh AM, Boomsma DI, Kahn RS, den Braber A, de Geus EJ, Deary IJ, Hulshoff Pol HE, Williamson DE, Blangero J, van 't Ent D, Thompson PM, Glahn DC. Multi-site study of additive genetic effects on fractional anisotropy of cerebral white matter: Comparing meta and mega-analytical approaches for data pooling. Neuroimage. 2014 Jul 15;95:136-50.
Yang X, Kang H, Newton AT, Landman BA. Evaluation of statistical inference on empirical resting state fMRI. IEEE Trans Biomed Eng. 2014 Apr;61(4):1091-9.
Asman AJ, Landman BA. Hierarchical performance estimation in the statistical label fusion framework. Med Image Anal. 2014 Oct;18(7):1070-81.
McRackan TR, Carlson ML, Reda FA, Noble JH, Rivas A. Bifid facial nerve in congenital stapes footplate fixation. Otol Neurotol. 2014 Jun;35(5):e199-201.
Liu Y, Konrad PE, Neimat JS, Tatter SB, Yu H, Datteri RD, Landman BA, Noble JH, Pallavaram S, Dawant BM, DHaese PF. Multisurgeon, multisite validation of a trajectory planning algorithm for deep brain stimulation procedures. IEEE Trans Biomed Eng. 2014 Sep;61(9):2479-87.
Steele BA, Bell CS, Obstein KL, Valdastri P. Tablet Technology to Improve Colonoscopy. Young Scientist Journal. 2014;(4):36-38.
Simpson AL, Sun K, Pheiffer TS, Rucker DC, Sills AK, Thompson RC, Miga MI. Evaluation of Conoscopic Holography for Estimating Tumor Resection Cavities in Model-Based Image-Guided Neurosurgery. IEEE Trans Biomed Eng. 2014 Jun;61(6):1833-43.
Simpson AL, Geller DA, Hemming AW, Jarnagin WR, Clements LW, D'Angelica MI, Dumpuri P, Gönen M, Zendejas I, Miga M, Stefansic JD. Liver Planning Software Accurately Predicts Postoperative Liver Volume and Measures Early Regeneration. J Am Coll Surg. 2014 Aug; 219(2):199-207.
Rucker DC, Wu Y, Ondrake JE, Pheiffer TS, Simpson AL, Jarnigan WR, Miga MI. Mechanics-Based Nonrigid Registration of CT Liver Volumes to Intraoperative Surface Data. IEEE Transactions on Medical Imaging. 2014; 33(1);147-158.
Ding J, Simaan N. Choice of Handedness and Automated Suturing for Anthropomorphic Dual-arm Surgical Robots. Robotica. 2014;1-19.
Dharamsi LM, Bajo A, Netterville JL, Garrett CG, Simaan N. Evaluation of a Telerobotic System for Transnasal Surgery of the Larynx and Airways in Cadavers. Otolaryngol Head Neck Surg. 2014 Apr 30;151(1):107-111.
Rohani P1, Pile J, Kahrs LA, Balachandran R, Blachon GS, Simaan N, Labadie RF. Forces and Trauma Associated with Minimally Invasive Image-Guided Cochlear Implantation. Otolaryngol Head Neck Surg. 2014 Apr;150(4):638-45.
Carter A, Yu H, Simaan N. Experimental Investigation of Motion Planning for Successful Membrane Peeling and Cannulation. Young Scientist Journal. 2014 May;43-44.
Pallavaram S, Phibbs FT, Tolleson C, Davis TL, Fang J, Hedera P, Li R, Koyama T, Dawant BM, D'Haese, PF. Neurologist Consistency in Interpreting Information Provided by an Interactive Visualization Software for Deep Brain Stimulation Postoperative Programming Assistance. Neuromodulation. 2014 Jan;17(1):11-5.
Labadie RF, Balachandran R, Noble JH, Blachon GS, Mitchell JE, Reda FA, Dawant BM, Fitzpatrick JM. Minimally Invasive Image-Guided Cochlear Implantation Surgery: First Report of Clinical Implementation. Laryngoscope. 2014 Aug;124(8):1915-22.
Balachandran R, Tsai BS, Ramachandra T, Noble JH, Dawant BM, Labadie RF, Bennett ML. Minimally-Invasive Image-Guided Access for Drainage of Petrous Apex Lesions. Otol Neurotol. 2014 Apr;35(4):649-55.
Schuster D, Kratchman L, Labadie RF. CCharacterization of Intracochlear Rupture Forces in Fresh Human Cadaveric Cochleae. Otol Neurotol. 2014 Sep 17.
Reda FA, McRackan TR, Labadie RF, Dawant BM, Noble JH. Automatic Segmentation of Intra-Cochlear Anatomy in Post-Implantation CT of Unilateral Cochlear Implant Recipients. Medical Image Analysis. 2014 Apr;18(3):605-15.
Pheiffer TS, Thompson RC, Rucker DC, Simpson AL, Miga MI. Model-Based Correction of Tissue Compression for Tracked Ultrasound in Soft Tissue Image-Guided Surgery. Ultrasound Med Biol. 2014 Apr;40(4):788-803.
Pasricha T, Smith BF, Mitchell VR, Fang B, Brooks E, Gerding J, Washington M, Valdastri P, Obstein KL. Controlled Colonic Insufflation by a Remotely-Triggered Capsule for Improved Mucosal Visualization. Endoscopy. 2014 Jul;46(7):614-8.
McRackan TR, Rivas A, Hedley-Williams A, Raj V, Dietrich MS, Clark NK, Labadie RF. Impedance Testing on Cochlear Implants after Electroconvulsive Therapy. J ECT. 2014 Dec 30(4):303-8.
Herrell SD, Webster R, Simaan N. Future Robotic Platforms in Urologic Surgery: Recent Developments. Curr Opin Urol. 2014 Jan; 24(1):118-26.
Grove K, Dobish J, Harth E, Ingram MC, Galloway RL, Mawn LA. Trans-Meningeal Drug Delivery to Optic Nerve Ganglion Cell Axons Using a Nanoparticle Drug Delivery System. Exp Eye Res. 2014 Jan 11(8):42-5.
Gilbert HB, Hendrick RJ, Remirez AA, Webster RJ III. A Robot for Transnasal Surgery Featuring Needle-Sized Tentacle-Like Arms. Expert Review of Medical Devices. 2014;11(1):5-7.
Di Natali C, Beccani M, Obstein KL, Valdastri P. A Wireless Platform for In Vivo Measurement of Resistant Properties of the Gastrointestinal Tract. Physiol Meas. 2014 Jul;35(7):1197-214.
Byram B, Han K, van Assche L, Wolf P, Trahey G. The Feasibility of Myocardial Infarct Visualization using Atrial Kick Induced Strain (AKIS) Contrast. Ultrasound Med Biol. 2014 Jun;40(6):1104-17.
Byram B, Jakovljevic M. Ultrasonic Multipath and Beamforming Clutter Reduction: A Chirp Model Approach. IEEE Trans Ultrason Ferroelectr Freq Control. 2014 Mar;61(3):428-40.
Bryan FW, Xu Z, Asman AJ, Allen WM, Reich DS, Landman BA. Self-Assessed Performance Improves Statistical Fusion of Image Labels. Med Phys. 2014 Mar;41(3):031903.
Beccani M, Di Natali C, Sliker LJ, Schoen JA, Rentschler ME, Valdastri P. Wireless Tissue Palpation for Intraoperative Detection of Lumps in Soft Tissue. IEEE Trans Biomed Eng. 2014 Feb;61(2):353-61.
Balachandran R, Fritz MA, Dietrich MS, Danilchenko A, Mitchell JE, Oldfield VL, Lipscomb WW, Fitzpatrick JM, Neimat JS, Konrad PE, Labadie RF. Clinical Testing of an Alternate Method of Inserting Bone-Implanted Fiducial Markers. Int J Comput Assist Radiol Surg. 2014 Sep;9(5):913-20.
Balachandran R, Reda FA, Noble JH, Blkachon GS, Dawant BM, Fitzpatrick JM, Labadie RF. Minimally Invasive Image-Guided Cochlear Implantation for Pediatric Patients: Clinical Feasibility Study. Otolaryngol Head Neck Surg. 2014 Apr;150(4):631-7.
Asman AJ, Bryan FW, Smith SA, Reich DS, Landman BA. Groupwise Multi-Atlas Segmentation of the Spinal Cord’s Internal Structure. Med Image Anal. 2014 Apr;18(3):460-71.
2013
Rucker DC, Das J, Gilbert HB, Swaney PJ, Miga MI, Sarkar N, Webster RJ 3rd. Sliding Mode Control of Steerable Needles. IEEE Trans Robot. 2013 Oct;29(5):1289-1299.
Simi M, Pickens R, Menciassi A, Herrell SD, Valdastri P. Fine Tilt Tuning of a Laparoscopic Camera by Local Magnetic Actuation: Two-Port Nephrectomy Experience on Human Cadavers. Surg Innov. 2013 Aug;20(4):385-94.
Coffey AM, Miga MI, Chen I, Thompson RC. Toward a Preoperative Planning Tool for Brain Tumor Resection Therapies. Int J Comput Assist Radiol Surg. 2013 Jan;8(1):87-97.
Yankeelov TE, Atuegwu N, Hormuth D, Weis JA, Barnes SL, Miga MI, Rericha EC, Quaranta V. Clinically Relevant Modeling of Tumor Growth and Treatment Response. Sci Transl Med. 2013 May 29;5(187):187-9.
Xu Z, Allen WM, Baucom RB, Poulose BK, Landman BA. Texture Analysis Improves Level Set Segmentation of the Anterior Abdominal Wall. Medical Physics. 2013 Dec;40(12):121901.
Weis JA, Miga MI, Arlinghaus LR, Li X, Chakravarthy AB, Abramson V, Farley J, Yankeelov TE. A Mechanically Coupled Reaction-diffusion Model for Predicting the Response of Breast Tumors to Neoadjuvant Chemotherapy. Phys Med Biol. 2013 Sep 7; 58(17):5851-66.
Webster RJ, Hassall C, Herdman CM, Godin JG, Sherratt TN. Disruptive Camouflage Impairs Object Recognition. Biol Lett. 2013 Oct 23;9(6):20130501.
Rotemberg V, Byram B, Wang M, Palmeri M, Nightingale K. Ultrasonic Characterization of the Nonlinear Properties of Canine Livers by Measuring Shear Wave Speed and Axial Strain with Increasing Venous Pressure. J Biomech. 2013 Jul 26;46(11):1875-81.
Pelosi S, Wanna GB, Gifford RH, Sisler-Dinwiddie A, Bom Braga GP, Bennett ML, Labadie RF, Rivas A, Haynes DS. Unilateral Auditory Performance Before and After Bilateral Sequential Cochlear Implantation. Otol Neurotol. 2013 Dec;34(9):1642-7.
Pelosi S, Wanna G, Hayes C, Sunderhaus L, Haynes DS, Bennett ML, Labadie RF, Rivas A. Cochlear implantation versus hearing amplification in patients with auditory neuropathy spectrum disorder. Otolaryngol Head Neck Surg. 2013 May;148(5):815-21.
Pelosi S, Noble JH, Dawant BM, Labadie RF. Analysis of Intersubject Variations in Intracochlear and Middle Ear Surface Anatomy for Cochlear Implantation. Otool Neurotol. 2013 Dec;34(9)1675-80.
Nobel JH, Labadie RF, Gifford RH, Dawant BM. Image-Guidance Enables New Methods for Customizing Cochlear Implant Stimulation Strategies. IEEE Trans Neural Syst Rehabil Eng. 2013 Sept;21(5):820-9.
McRackan TR, Gifford RH, Cahue CN, Labadie RF, Wanna GB, Haynes DS, Bennett ML. Cochlear Implantation in Ménière's Disease Patients. Otol Neurotol. 2014 Mar;35(3):421-5.
McRacken TR, Balachandran R, Blachon GS, Mithell JE, Noble JH, Wright CG, Fitzpatrick JM, Dawant BM, Labadie RF. Validation of Minimally Invasive, Image-Guided Cochlear Implantation using Advanced Bionics, Cochlear, and Medel Electrodes in a Cadaver Model. Int J Comput Assist Radiol Surg. 2013 Nov;(6):989-95.
Landman BA, Bogovic JA, Carass A, Chen M, Roy S, Shiee N, Yang Z, Kishore B, Pham D, Bazin PL, Resnick SM, Prince JL. System for Integrated Neuroimaging Analysis and Processing of Structure. Neuroinformatics. 2013 Jan;11(1):91-103.
Kahrs LA, Labadie RF. Freely-Available, True-Color Volume Rendering Software and Cryohistology Data Sets for Virtual Exploration of the Temporal Bone Anatomy. ORL J Otorhinolaryngol Relat Spec. 2013;75(1):46-53.
Holmes MJ, Yang X, Landman BA, Ding Z, Kang H, Abou-Khalil B, Sonmezturk HH, Gore JC, Morgan VL. Functional networks in temporal lobe epilepsy: a voxel-wise study of resting state functional connectivity and gray matter concentration. Brain Connect. 2013;3(1):22-30.
Han Z, Davis N, Fuchs L, Anderson AW, Gore JC, Dawant BM. Relation Between Brain Architecture and Mathematical Ability in Children; A DBM Study. Magn Reson Imaging. 2013 Dec;31(10):1645-56.
Deely MA, Chen A, Datteri RD, Noble J, Cmelak A, Donnelly E, Malcolm A, Moretti L, Jaboin J, Niermann K, Yan ES, Yu DS, Dawant BM. An Individualized Weight-Based Goal Urine Volume Model Significantly Improves Expected Calcium Concentrations Relative to a 2-L Goal Urine Volume. Surg Innov. 2013 Aug;20(4):385-94.
Deely MA, Chen A, Dattero RD, Noble J, Cmelak A, Donnelly E, Malcolm A, Moretti L, Jaboin J, Niermann K, Yang ES, Yu DS, Dawant BM. Segmentation Editing Improves Efficiency While Reducing Inter-Expert Variation and Maintaining Accuracy for Normal Brain Tissue in the Presence of Space-Occupying Lesions.. Phys Med Biol. 2013 Jun 21;58(12):4071-97.
Bottenus N, Byram B, Dahl J, Trahey G. Synthetic Aperture Focusing for Short-Lag Spatial Coherence Imaging. IEEE Trans Ultrason Ferroelectr Freq Control. 2013 Sep;60(9):1816-26.
Bell CS, Obstein KL, Valdastri P. Image Partitioning and Illumination in Image-Based Pose Detection for Teleoperated Flexible Endoscopes. Artif Intell Med. 2013 Nov;59(3):185-96.
Burgner J, Rucker DC, Gilbert HB, Swaney PJ, Russell PT III, Weaver KD, Webster RJ III. A Telerobotic System for Transnasal Surgery. IEEE Transactions on Mechatronics. 2013 Jun 19;19(3):996-1006.
Swaney PJ, Burgner J, Gilbert HB, Webster RJ III. A Flexure-Based Steerable Needle: High Curvature with Reduced Tissue Damage. IEEE Trans Biomed Eng. 2013 Apr;60(4):906-9.
Gorlewicz JL, Battaglia S, Smith BF, Ciuti G, Gerding J, Menciassi A, Obstein KL, Valdastri P, Webster RJ III. Wireless Insufflation of the Gastrointestinal Tract. IEEE Trans Biomed Eng. 2013 May;60(5):1225-33.
Ueda J, Comber DB, Slightam J, Turkseven M, Gervasi V, Webster RJ III, Barth EJ. MRI-Compatible Fluid-Powered Medical Devices. Dynamic Systems and Control Magazine. 2013;1(2):13-16.
Bekeny J, Swaney PJ, Webster RJ III, Russell P, Weaver K. Forces Applied at the Skull Base During Transnasal Endoscopic Transsphenoidal Pituitary Tumor Excision. Journal of Neurological Surgery: Part B: Skull Base. J Neurol Surg B Skull Base. 2013 Dec;74(6):337-41.
Dillon NP, Kratchman LB, Dietrich MS, Labadie RF, Webster RJ 3rd, Withrow TJ. An Experimental Evaluation of the Force Requirements for Robotic Mastoidectomy. Otol Neurotol. 2013 Sep;34(7):e93-102.
Burgner J, Swaney PJ, Lathrop RA, Weaver KD, Webster RJ III. Debulking From Within:A Robotic Steerable Cannula for Intracerebral Hemorrhage Evacuation. IEEE Trans Biomed Eng. 2013 Sep;60(9):2567-75.
Byram BC, Trahey GE, Palmeri ML. Bayesian Speckle Tracking. Part I: An Implementable Perturbation to the Likelihood Function for Ultrasound Displacement Estimation. IEEE Trans. Ultrasonics, Ferroelectrics, and Frequency Control. 2013;60(1):132-143.
Byram BC, Trahey GE, Palmeri ML. Bayesian Speckle Tracking. Part II: Biased Ultrasound Displacement Estimation. IEEE Trans. Ultrasonics, Ferroelectrics, and Frequency Control. 2013;60(1):144-157.
Wang M, Byram B, Palmeri M, Rouze N, Nightingale K. On the Precision of Time-of-Flight Shear Wave Speed Estimation in Homogeneous Soft Solids: Initial Results Using a Matrix Array Transducer. IEEE Trans. Ultrasonics, Ferroelectrics, and Frequency Control. 2013;60(4):758-770.
Simpson A, Burgner J, Glisson C, Herrell S, Ma B, Pheiffer T, Webster R, Miga M. Comparison Study of Contact and Non-Contact Intraoperative Surface Acquisition Methods for Surgical Navigation. IEEE Transactions on Biomedical Engineering. 2013;60(4):1090-1099.
Weaver KD, Webster R, Swaney P, Burgner J, Russell P, Gilbert H, Bekeny J, Hendrick R. The Use of Teleoperated Concentric Tube Robots for Transsphenoidal Parasellar Surgery. Journal of Neurological Surgery Part B. 2013;74-A123.
Goldman RE, Bajo A, Simaan N. Algorithms for Autonomous Exploration and Estimation in Compliant Environments. Robotica. 2013;31(1):71-88.
Simaan N, Bajo A, Reiter A, Long W, Allen P, Fowler D. Lessons Learned Using the Insertable Robotic Effector Platform (IREP) for Single Port Access Surgery. J Robotic Surgery. 2013 Sept;7(3):235-240.
Zhang J, Roland JT, Manolidis S, Simaan N. Optimal Design of Under-actuated Steerable Electrode Arrays for Optimal Insertions. ASME Journal of Mechanisms and Robotics. 2013;5(1):011008.
Lauzon C, Landman B. Correcting Power and P-Value Calculations for Bias in Diffusion Tensor Imaging. Magn Reson Imaging. 2013 Jul;31(6):857-64.
Asman A, Chambless L, Thompson R, Landman B. Out-of-Atlas Likelihood Estimation Using Multi-Atlas Segmentation. Med Phys. 2013 Apr;40(4):043702.
Lauzon C, Asman A, Esparza M, Burns S, Fan Q, Gao Y, Anderson A, Davis N, Cutting L, Landman B. Simultaneous Analysis and Quality Assurance for Diffusion Tensor Imaging. PLoS One. 2013 Apr 30;8(4):e61737.
Jahanshad N, Kochunov PV, Sprooten E, Mandl RC, Nichols TE, Almasy L, Blangero J, Brouwer RM, Curran JE, de Zubicaray GI, Duggirala R, Fox PT, Hong LE, Landman BA, Martin NG, McMahon KL, Medland SE, Mitchell BD, Olvera RL, Peterson CP, Starr JM, Sussmann JE, Toga AW, Wardlaw JM, Wright MJ, Hulshoff Pol HE, Bastin ME, McIntosh AM, Deary IJ, Thompson PM, Glahn DC. Multi-Site Genetic Analysis of Diffusion Images and Voxelwise Heritability Analysis: A Pilot Project of the ENIGMA–DTI Working Group. Neuroimage. 2013 Nov 1;81:455-69.
Obstein K, Battaglia S, Smith BF, Gerding J, Valdastri V. Novel Approach for Colonic Insufflation via an Untethered Capsule (With Video). Gastrointestinal Endoscopy. 2013;77(3):516-517.
Simi M, Silvestri M, Cavallotti C, Vatteroni M, Valdastri P, Menciassi A, Dario P. Magnetically Activated Stereoscopic Vision System for Laparoendoscopic Single Site Surgery. IEEE/ASME Transactions on Mechatronics. 2013;18(3):1140-1151.
Horeman T, Kurteva D, Valdastri P, Jansen F, van den Dobbelsteen J, Dankelman J. The Influence of Instrument Configuration on Tissue Handling Force in Laparoscopy. Surgical Innovation. 2013;20(3):260-267.
Simi M, Pickens R, Menciassi A, Herrell S, Valdastri P. Fine Tilt Tuning of a Laparoscopic Camera by Local Magnetic Actuation: Two-Port Nephrectomy Experience on Human Cadavers. Surg Innov. 2013 Aug;20(4):385-94.
Arezzo A, Menciassi A, Valdastri P, Ciuti G, Lucarini G, Salerno M, Di Natali C, Verra M, Dario D, Morino M. Experimental Assessment of a Novel Robotically-Driven Endoscopic Capsule Compared to Traditional Colonoscopy. Dig Liver Dis. 2013 Aug;45(8):657-62.
Kahrs LA, Labadie RF. Virtual Exploration and Comparison of Linear Mastoid Drilling Trajectories with True-Color Volume Rendering and the Visible Ear Dataset. Stud Health Technol Inform. 2013;184:215-21.
Goldman RE, Bajo A, Maclachlan LS, Pickens R, Herrell SD, Simaan N. Design and Performance Evaluation of a Minimally Invasive Telerobotic Platform for Transurethral Surveillance and Intervention. IEEE Trans Biomed Eng. 2013 Apr;60(4):918-25.
Wanna GB, Carlson ML, Blachon GS, Noble JH, Dawant BM, Labadie RF, Balachandran R. Implantation of the Completely Ossified Cochlea: An Image-Guided Approach. Otol Neurotol. 2013 Apr;34(3):522-5.
Simpson AL, Burgner J, Glisson CL, Herrell SD, Ma B, Pheiffer TS, Webster RJ III, Miga MI. Comparison Study of Intraoperative Surface Acquisition Methods for Surgical Navigation. IEEE Trans Biomed Eng. 2013 Apr;60(4):1090-9.
Rao AS, Dawant BM, Bodenheimer RE, Li R, Fang J, Phibbs F, Hedera P, Davis T. Validating an Objective Video-Based Dyskinesia Severity Score in Parkinson's Disease Patients. Parkinsonism Relat Disord. 2013 Feb;19(2):232-7.
D'Haese PF, Pallavaram S, Kao C, Neimat JS, Konrad PE, Dawant BM. Effect of Data Normalization on the Creation of Neuro-Probabilistic Atlases. Stereotact Funct Neurosurg. 2013 Feb 27;91(3):148-152.
Schneider JS, Burgner J, Webster RJ III, Russell PT III. Robotic Surgery for the Sinuses and Skull Base: What Are the Possibilities and What Are the Obstacles? Current Opinion in Otolaryngology; Head and Neck Surgery. 2013;21(1):11-16.
Obstein KL, Valdastri P. Advanced Endoscopic Technologies for Colorectal Cancer Screening. World J Gastroenterol. 2013 Jan 28;19(4):431-9.
Simi M, Pickens R, Menciassi A, Herrell SD, Valdastri P. Fine Tilt Tuning of a Laparoscopic Camera by Local Magnetic Actuation: Two-Port Nephrectomy Experience on Human Cadavers. Surg Innov. 2013 Aug;20(4):385-94.
Simpson AL, Dumpuri P, Ondrake JE, Weis JA, Jarnagin WR, Miga MI. Preliminary Study of a Novel Method for Conveying Corrected Image Volumes in Surgical Navigation. Int J Med Robot. 2013 Mar;9(1):109-18.
Coffey AM, Miga MI, Chen I, Thompson RC. Toward a Preoperative Planning Tool for Brain Tumor Resection Therapies. Int J Comput Assist Radiol Surg. 2013 Jan;8(1):87-97.
2012
Yang X, Lauzon CB, Crainiceanu C, Caffo B, Resnick SM, Landman BA. Biological Parametric Mapping Accounting for Random Regressors with Regression Calibration and Model II Regression. NeuroImage. 2012 Sep;62(3):1761-8.
Xu Z, Asman AJ, Singh E, Chambless L, Thompson R, Landman BA. Segmentation of Malignant Gliomas through Remote Collaboration and Statistical Fusion. Med Phys. 2012 Oct;39(10):5981-9.
Valdastri P, Simi M, Webster RJ. 3rd Advanced Technologies for Gastrointestinal Endoscopy. Annu Rev Biomed Eng. 2012;14:397-429.
Simpson AL, Dumpuri P, Ondrake JE, Weis JA, Jarnagin WR, Miga MI. Preliminary Study of a Novel Method for Conveying Corrected Image Volumes in Surgical Navigation. Int J Med Robot. 2013 Mar;9(1):109-18.
Pelosi S, Rivas A, Haynes DS, Bennett ML, Labadie RF, Hedley-Williams A, Wanna GB. Stimulation Rate Reduction and Auditory Development in Poorly Performing Cochlear Implant Users With Auditory Neuropathy. Otol Neurotol. 2012 Dec;33(9):1502-6.
Lauzon CB, Crainiceanu C, Caffo BC, Landman BA. Assessment of Bias in MRI Diffusion Tensor Imaging Parameters Using SIMEX. Magn Reson Med. 2013 Mar 1;69(3):891-902.
Li B, Bryan F, Landman BA. Next Generation of the JAVA Image Science Toolkit (JIST) Visualization and Validation. Insight J. 2012 Aug 15;2012:1-16.
Landman BA, Asman AJ, Scoggins D, Bogovic JA, Xing F, Prince JL. Robust Statistical Fusion of Image Labels. IEEE Transactions on Medical Imaging. 2012 Feb;31(2):512-22.
Landman BA, Asman AJ, Scoggins AG, Bogovic JA, Stein JA, Prince JL. Foibles, Follies, and Fusion: Web-Based Collaboration for Medical Image Labeling. Neuroimage. 2012 Jan 2;59(1):530-9.
Jung CH, Choi SI, Du AX, Cuzzocreo JL, Landman BA, Perlman SL, Baloh RW, Zee DS, Toga AW, Prince JL, and Ying SH. MRI Shows Lobule-specific Susceptibility to Degeneration in Spinocerebellar Ataxia Type 2. Cerebellum. 2012 Mar;11(1):272-9.
Gray WR, Bogovic JA, Vogelstein JT, Landman BA, Prince JL, Vogelstein. Magnetic Resonance Connectome Automated Pipeline: an Overview. IEEE Pulse. 2012 Mar;3(2):42-8.
Bogovic JA, Jedynak B, Rigg R, Du A, Landman BA, Prince JL, Ying SH. Achieving Expert Results Using a Hierarchical Cerebellum Parcellation Protocol for Multiple Inexpert Human Raters. Neuroimage. 2013 Jan 1;64:616-29.
Beason-Held LL, Thambisetty M, Deib MG, Sojkova J, Landman BA, Zonderman AB, Ferrucci L, Kraut MA, Resnick SM. Baseline Cardiovascular Risk Predicts Subsequent Changes in Resting Brain Function. Stroke. 2012 Jun;43(6):1542-7.
Asman AJ, Landman BA. Formulating Spatially Varying Performance in the Statistical Fusion Framework. IEEE Trans Med Imaging. 2012 Jun;31(6):1326-36.
Hsu SJ, Byram BC, Bouchard RR, Dumont DM, Wolf PD, Trahey GE. Acoustic Radiation Force Impulse Imaging of Mechanical Stiffness Propagation in Myocardial Tissue. Ultrasonic Imaging. 2012;34(3):142-168.
Bell MAL, Byram BC, Harris EJ, Evans P, Bamber J. In Vivo Liver Tracking with a High Volume Rate 4D Ultrasound Scanner and a 2D Matrix Array Probe. Physics in Medicine and Biology. 2012;57(5):1359-1374.
Byram B, Trahey GE, Jensen JA. A Method for Direct Localized Sound Speed Estimates Using Registered Virtual Detectors. Ultrasonic Imaging. 2012;34(3):159-180.
Byram BC, Trahey GE, Palmeri ML. Effect of Prior Probability Quality on Biased Time-Delay Estimation. Ultrasonic Imaging. 2012;34(2):65-80.
Galloway R, Duke S, Miga M. Image-Guided Abdominal Surgery and Therapy Delivery. J Healthc Eng. 2012 Jun;3(2):203-228.
Abramson R, Arlinghaus L, Weis J, Li X, Dula A, Chekmenev Y, Smith S, Miga M, Abramson V, Yankeelov T. Current and Emerging Quantitative Magnetic Resonance Imaging Methods for Assessing and Predicting the Response of Breast Cancer to Neoadjuvant Therapy. Breast Cancer: Targets and Therapy. 2012;4:139-154.
Burgner J, Swaney P, Bruns T, Clark M, Rucker D, Burdette E, Webster R. An Autoclavable Steerable Cannula Manual Deployment Device: Design and Accuracy Analysis. ASME Journal of Medical Devices. 2012;6(4):041007.
Bajo A, Simaan N. Kinematics-Based Detection and Localization of Constraints Along Continuum Robots. IEEE Transactions on Robotics. 2012;28(2):291-301.
Ding J, Goldman RE, Xu K, Fowler D, Simaan N. Design and Coordination Kinematics of an Insertable Robotic Effectors Platform (IREP) for Single Port Access Surgery. IEEE ASME Trans Mechatron. 2013 Oct:1612-1624.
Wei W, Simaan N. Modeling, Force Sensing and Control of Flexible Cannulas for Micro-Stent Delivery. J Dyn Sys, Meas, Control. 2012;134(4):041004-16.
Chen Y, Wang H, Zhang J, Garty G, Simaan N, Yao YL, Brenner DJ. Automated Recognition of Robotic Manipulation Failures in High-Throughput Biodosimetry Tool. Expert Syst Appl. 2012 Aug;39(10):9602-9611.
Salerno M, Ciuti G, Lucarini G, Rizzo R, Valdastri P, Menciassi A, Landi A, Dario P. A Discrete-Time Localization Method for Capsule Endoscopy Based on On-Board Magnetic Sensing.Measurement Science and Technology. 2012;23:015701.
Simi M, Tolou N, Valdastri P, Herder J, Menciassi A, Dario P. Modeling of a Compliant Joint in a Magnetic Levitation System for an Endoscopic Camera. Mechanical Sciences. 2012;3:5-14.
Valdastri P, Ciuti G, Verbeni A, Menciassi A, Dario P, Arezzo A, Morino M. Magnetic Air Capsule Robotic System: Proof of Concept of a Novel Approach for Painless Colonoscopy. Surgical Endoscopy. 2012;26(5):1238-1246.
Ciuti G, Pateromichelakis N, Sfakiotakis S, Valdastri P, Menciassi A, Tsakiris P, Dario P. A Wireless Module for Vibratory Motor Control and Inertial Sensing in Capsule Endoscopy. Sensors and Actuators A: Physical. 2012;186:270-276.
Valdastri P, Simi M, Webster R. Advanced Technologies for Gastrointestinal Endoscopy. Annual Review of Biomedical Engineering. 2012;14:397-429.
Quintero HA, Farris RJ, Goldfarb M. A Method for the Autonomous Control of Lower Limb Exo-skeletons for Persons with Paraplegia. J Med Device. 2012 Dec 12;6(4):041003.
Noble JH, Gifford RH, Labadie RF, Dawant BM. Statistical Shape Model Segmentation and Frequency Mapping of Cochlear Implant Stimulation Targets in CT. Med Image Comput Comput Assist Interv. 2012;15(Pt 2):421-8.
Datteri RD, Dawant BM. Estimation and Reduction of Target Registration Error. Med Image Comput Comput Assist Interv. 2012;15(Pt 3):139-46.
Reda FA, Noble JH, Labadie RF, Dawant BM. Automatic Pre- to Intra-Operative CT Registration for Image-Guided Cochlear Implant Surgery. EEE Trans Biomed Eng. 2012 Nov;59(11):3070-7.
Xu Z, Asman AJ, Singh E, Chambless L, Thompson R, Landman BA. Segmentation of Malignant Gliomas Through WebMILL: A First Look. Proc Soc Photo Opt Instrum Eng. 2012 April 5;8318.
Kaffenberger SD, Keegan KA, Bansal NK, Morgan TM, Tang DH, Barocas DA, Penson DF, Davis R, Clark PE, Chang SS, Cookson MS, Herrell SD, Smith JA Jr. Salvage Robotic-Assisted Laparoscopic Radical Prostatectomy: A Single Institution, Five-Year Experience. J Urol. 2013 Feb;189(2):507-13.
Grantham DW, Ashmead DH, Haynes DS, Hornsby BW, Labadie RF, Ricketts TA. Horizontal Plane Localization in Single-Sided Deaf Adults Fitted with a Bone-Anchored Hearing Aid (BAHA). Ear Hear. 2012 Sep;33(5):595-603.
Maier-Hein L, Franz AM, dos Santos TR, Schmidt M, Fangerau M, Meinzer HP, Fitzpatrick JM. Convergent Iterative Closest-Point Algorithm to Accomodate Anisotropic and Inhomogenous Localization Error. IEEE Trans Pattern Anal Mach Intell. 2012 Aug;34(8):1520-32.
Weis JA, Granero-Moltó F, Myers TJ, Longobardi L, Spagnoli A, Miga MI. Comparison of MicroCT and an Inverse Finite Element Approach for Biomechanical Analysis: Results in a Mesenchymal Stem Cell Therapeutic System for Fracture Healing. J Biomech. 2012 Aug 9;45(12):2164-70.
Kratchman LB, Schurzig D, McRackan TR, Balachandran R, Noble JH, Webster III RJ, Labadie RF. A Manually Operated, Advance Off-Stylet Insertion Tool for Minimally Invasive Cochlear Implantation Surgery. IEEE Trans Biomed Eng. 2012 Oct;59(10):2792-800.
Burgner J, Simpson AL, Fitzpatrick JM, Lathrop RA, Herrell SD, Miga MI, Webster RJ 3rd. A Study on the Theoretical and Practical Accuracy of Conoscopic Holography-Based Surface Measurements: Toward Image Registration in Minimally Invasive Surgery. Int J Med Robot. 2013 Jun;9(2):190-203.
Han Z, Thornton-Wells TA, Dykens EM, Gore JC, Dawant BM. Effect of Nonrigid Registration Algorithms on Deformation-Based Morphometry: A Comparative Study with Control and Williams Syndrome Subjects. Magn Reson Imaging. 2012 Jul;30(6):774-88.
Bourne SK, Conrad A, Konrad PE, Neimat JS, Davis TL. Ventricular Width and Complicated Recovery Following Deep Brain Stimulation Surgery. Stereotact Funct Neurosurg. 2012;90(3):167-72.
Singh E, Asman AJ, Xu Z, Chambless L, Thompson R, Landman BA. Collaborative Labeling of Malignant Glioma with WebMILL: A First Look. Proc Soc Photo Opt Instrum Eng. 2012 Apr 5;8318. pii: 831813.
D'Haese PF, Pallavaram S, Li R, Remple MS, Kao C, Neimat JS, Konrad PE, Dawant BM. CranialVault and its CRAVE Tools: A Clinical Computer Assistance System for Deep Brain Stimulation (DBS) Therapy. Med Image Anal. 2012 Apr;16(3):744-53.
McRackan TR, Reda FA, Rivas A, Noble JH, Dietrich MS, Dawant BM, Labadie RF. Comparison of Cochlear Implant Relevant Anatomy in Children Versus Adults. Otol Neurotol. 2012 Apr;33(3):328-34.
Balachandran R, Schurzig D, Fitzpatrick JM, Labadie RF. Evaluation of portable CT scanners for otologic image-guided surgery. Int J Comput Assist Radiol Surg. 2012 Mar;7(2):315-21.
Kahn E, D'Haese PF, Dawant B, Allen L, Kao C, Charles PD, Konrad P. Deep Brain Stimulation in Early Stage Parkinson's Disease: Operative Experience from a Prospective Randomised Clinical Trial. J Neurol Neurosurg Psychiatry. 2012 Feb;83(2):164-70.
Pheiffer TS, Simpson AL, Lennon B, Thompson RC, Miga MI. Design and Evaluation of an Optically-Tracked Single-CCD Laser Range Scanner. Med Phys. 2012 Feb;39(2):636-42.
Chambless LB, Mawn LA, Forbes JA, Thompson RC. Porous Polyethylene Implant Reconstruction of the Orbit after Resection of Spheno-Orbital Meningiomas: A Novel Technique. J Craniomaxillofac Surg. 2012 Jan;40(1):e28-32.
Chen A, Niermann KJ, Deeley MA, Dawant BM. Evaluation of Multiple-Atlas-Based Strategies for Segmentation of the Thyroid Gland in Head and Neck CT Images for IMRT. Phys Med Biol. 2012 Jan 7;57(1):93-111.
Dalley SA, Varol HA, Goldfarb M. A Method for the Control of Multigrasp Myoelectric Prosthetic Hands.IEEE Trans Neural Syst Rehabil Eng. 2012 Jan;20(1):58-67.
Herrell SD, Galloway RL, Su LM. Image-Guided Robotic Surgery: Update on Research and Potential Applications in Urologic Surgery. Curr Opin Urol. 2012 Jan;22(1):47-54.
2011
Yang X, Beason-Held L, Resnick SM, Landman BA. Biological Parametric Mapping with Robust and Non-Parametric Statistics. NeuroImage. 2011 Jul 15;57(2):423-30.
Pensabene V, Valdastri P, Tognarelli S, Menciassi A, Arezzo A, Dario P. Mucoadhesive Film for Anchoring Assistive Surgical Instruments in Endoscopic Surgery: In Vivo Assessment of Deployment and Attachment. Surg Endosc. 2011 Sep;(25)9:3071-9.
Kahrs LA, McRackan TR, Labadie RF. Intracochlear Visualization: Comparing Established and Novel Endoscopy Techniques. Otol Neurotol. 2011 Dec;(32)9:1590-5.
Landman BA, Huang AJ, Gifford A, Vikram DS, Lim IA, Farrell JA, Bogovic JA, Hua J, Chen M, Jarso S, Smith SA, Joel S, Mori S, Pekar JJ, Barker PB, Prince JL, van Zijl PC. Multi-Parametric Neuroimaging Reproducibility: A 3T Resource Study. NeuroImage. 2011 Feb 14;(54)4:2854-2866.
Landman BA, Bogovic JA, Wan H, El Zahraa ElShahaby F, Bazin PL, Prince JL. Resolution of Crossing Fibers with Constrained Compressed Sensing using Diffusion Tensor MRI. Neuroimage. 2012 Feb 1;59(3):2175-86.
Kahrs LA, McRackan TR, Labadie RF. Intracochlear Visualization: Comparing Established and Novel Endoscopy Techniques. Otol Neurotol. 2011 Dec;(32)9:1590-5.
Huang H, Prince JL, Mishra V, Carass A, Landman B, Park DC, Tamminga C, King R, Miller MI, van Zijl PC, Mori S. A Framework on Surface-Based Connectivity Quantification for the Human Brain. J Neurosci Methods. 2011 Apr 30;197(2):324-32.
Clements LP, Dumpuri W, Chapman B, Dawant BM, Galloway R, Miga MI. Organ Surface Deformation Measurement and Analysis in Open Hepatic Surgery: Method and Preliminary Results from 12 Clinical Cases. IEEE Trans Biomed Eng. 2011 Apr 25;58(8):2280-89.
Asman AJ, Landman BA. Robust Statistical Label Fusion through Consensus Level, Labeler Accuracy and Truth Estimation (COLLATE). IEEE Trans Med Imaging. 2011 Oct;30(10):1779-94.
Rucker DC, Webster RJ III. Statics and Dynamics of Continuum Robots with General Tendon Routing and External Loading. IEEE Transactions on Robotics. 2011;27(6):1033-1044.
Giannantonio DG, Dumont DM, Trahey GE, Byram BC. Physiological Motion Filters for In Vivo Cardiac ARFI. Ultrasonic Imaging. 2011;33(2):89-108.
Lediju M, Trahey GE, Byram BC, Dahl JJ. Short-Lag Spatial Coherence of Backscattered Echoes: Imaging Characteristics. IEEE Trans. Ultrasonics, Ferroelectrics, & Frequency Control. 2011;58(7):1377-1388.
Valdastri P, Ciuti G, Verbeni A, Menciassi A, Dario P, Arezzo A, Morino M. Magnetic Air Capsule Robotic System: Proof of Concept of a Novel Approach for Painless Colonoscopy. Surg Endosc. 2012 May;26(5):1238-46.
Sup F, Varol HA, Goldfarb M. Upslope Walking with a Powered Knee and Ankle Prosthesis: Initial Results with an Amputee Subject. IEEE Trans Neural Syst Rehabil Eng. 2011 Feb;19(1):71-8.
Pensabene V, Valdastri P, Tognarelli S, Menciassi A, Arezzo A, Dario P. Mucoadhesive Film for Anchoring Assistive Surgical Instruments in Endoscopic Surgery: In Vivo Assessment of Deployment and Attachment. Surg Endosc. 2011 Sep;25(9):3071-9.
Goldfarb M, Gondek S, Solorzano C, Lew JI. Surgeon-Performed Ultrasound Can Predict Benignity in Thyroid Nodules. Surgery. 2011 Sep;150(3):436-41.
Glisson C L, Altamar HO, Herrell SD, Clark P, Galloway RL. Comparison and Assessment of Semi-Automatic Image Segmentation in Computed Tomography Scans for Image-Guided Kidney Surgery. Med Phys. 2011 Nov;38(11):6265-74.
Farris RJ, Quintero HA, Goldfarb M. Preliminary Evaluation of a Powered Lower Limb Orthosis to Aid Walking in Paraplegic Individuals. IEEE Trans Neural Syst Rehabil Eng. 2011 Dec;19(6):652-9.
Altamar HO, Ong RE, Glisson CL, Viprakasit DP, Miga MI, Herrell SD, Galloway RL. Kidney Deformation and Intraprocedural Registration: A Study of Elements of Image-Guided Kidney Surgery. J Endourol. 2011 Mar;25(3):511-7.
Balachandran R, Schurzig D, Fitzpatrick JM, Labadie RF. Evaluation of Portable CT Scanners for Otologic Image-Guided Surgery. Int J Comput Assist Radiol Surg. 2012 Mar;7(2):315-21.
Chen I, Coffey AM, Ding S, Dumpuri P, Dawant BM, Thompson RC, Miga MI. Intraoperative Brain Shift Compensation: Accounting for Dural Septa. IEEE Trans Biomed Eng. 2011 Mar;58(3):499-508.
Danilchenko A, Balachandran R, Toennies JL, Baron S, Munske B, Fitzpatrick JM, Withrow TJ, Webster RJ 3rd, Labadie RF. Robotic mastoidectomy. Otol Neurotol. 2011 Jan;32(1):11-6.
Danilchenko A, Fitzpatrick JM. Erratum to General Approach to First-Order Error Prediction in Rigid Point Registration. IEEE Trans Med Imaging 2011 Nov;30(11):2012.
Danilchenko A, Fitzpatrick JM. General Approach to First-Order Error Prediction in Rigid Point Registration. IEEE Trans Med Imaging. 2011 Mar;30(3):679-93.
Deeley MA, Chen A, Datteri R, Noble JH, Cmelak AJ, Donnelly EF, Malcolm AW, Moretti L, Jaboin J, Niermann K, Yang ES, Yu DS, Yei F, Koyama T, Ding GX, Dawant BM. Comparison of Manual and Automatic Segmentation Methods for Brain Structures in the Presence of Space-Occupying Lesions: A Multi-Expert Study. Phys Med Biol:56(14):4557-77.
Ding S, Miga MI, Pheiffer TS, Simpson AL, Thompson RC, Dawant BM. Tracking of Vessels in Intra-Operative Microscope Video Sequences for Cortical Displacement Estimation. IEEE Trans Biomed Eng. 2011 Jul;58(7):1985-93.
Garty G, Chen Y, Turner HC, Zhang J, Lyulko OV, Bertucci A, Xu Y, Wang H, Simaan N, Randers-Pehrson G, Lawrence Yao Y, Brenner DJ. The Rabit: A Rapid Automated Biodosimetry Tool for Radiological Triage. II. Technological Developments. Int J Radiat Biol. 2011 Aug;87(8):776-90.
Ha KH, Varol HA, Goldfarb M. Volitional Control of a Prosthetic Knee Using Surface Electromyography. IEEE Trans Biomed Eng. 2011 Jan;58(1):144-51.
Hall, JE, McRackan TR, Labadie RF. Does Concomitant Mastoidectomy Improve Outcomes for Patients Undergoing Repair of Tympanic Membrane Perforations? Laryngoscope. 2011 Aug;121(8):1598-600.
Konrad PE, Neimat JS, Yu H, Kao CC, Remple MS, D'Haese PF, Dawant BM. Customized, Miniature Rapid-Prototype Stereotactic Frames for Use in Deep Brain Stimulator Surgery: Initial Clinical Methodology and Experience from 263 Patients from 2002 to 2008. Stereotact Funct Neurosurg. 2011;89(1):34-41.
Kratchman LB, Blachon GS, Withrow TJ, Balachandran R, Labadie RF, Webster RJ 3rd. Design of a Bone-Attached Parallel Robot for Percutaneous Cochlear Implantation. IEEE Trans Biomed Eng. 2011 Oct;58(10):2904-10.
Labadie RF, Fitzpatrick JM. Can Otolaryngology Compete with Larger Fields Regarding Impact Factor?: Is Percentile-Based Impact Factor a Solution? Otolaryngol Head Neck Surg. 2011 Jul;145(1):15-7.
Lawson, BE, Varol HA, Goldfarb M. Standing Stability Enhancement with an Intelligent Powered Transfemoral Prosthesis. IEEE Trans Biomed Eng. 2011 Sep;58(9):2617-24.
Lecoeur J, Wang F, Chen LM, Li R, Avison MJ, Dawant BM. Automated Longitudinal Registration of High Resolution Structural MRI Brain Sub-Volumes in Non-Human Primates. J Neurosci Methods. 2011 Oct 30;202(1):99-108.
Noble JH, Dawant BM. A New Approach for Tubular Structure Modeling and Segmentation Using Graph-Based Techniques. Med Image Comput Comput Assist Interv. 2011;14(3):305-12.
Noble JH, Dawant BM. An Atlas-Navigated Optimal Medial Axis and Deformable Model Algorithm (Nomad) for the Segmentation of the Optic Nerves and Chiasm in MR and CT Images. Med Image Anal. 2011 Dec;15(6):877-84.
Noble, JH, Labadie RF, Majdani O, Dawant BM. Automatic Segmentation of Intracochlear Anatomy in Conventional CT. IEEE Trans Biomed Eng. 2011 Sep;58(9):2625-32.
Pheiffer, TS, Ou JJ, Ong RE, Miga MI. Automatic Generation of Boundary Conditions Using Demons Nonrigid Image Registration for Use in 3-D Modality-Independent Elastography. IEEE Trans Biomed Eng. 2011 Sep;58(9):2607-16.
Reda, FA, Noble JH, Rivas A, McRackan TR, Labadie RF, Dawant BM. Automatic Segmentation of the Facial Nerve and Chorda Tympani in Pediatric CT Scans. Med Phys. 2011 Oct;38(10):5590.
Silvestri, M, Simi , Cavallotti C, Vatteroni M, Ferrari V, Freschi C, Valdastri P, Menciassi A, Dario P. Autostereoscopic Three-Dimensional Viewer Evaluation through Comparison with Conventional Interfaces in Laparoscopic Surgery. Surg Innov. 2011 Sep;18(3):223-30.
Tognarelli S, Pensabene V, Condino S, Valdastri P, Menciassi A, Arezzo A, Dario P. A Pilot Study on a New Anchoring Mechanism for Surgical Applications Based on Mucoadhesives. Minim Invasive Ther Allied Technol. 2011 Jan;20(1):3-13.
Valdastri, P, Susilo E, Forster T, Strohhofer C, Menciassi A, Dario P. Wireless Implantable Electronic Platform for Chronic Fluorescent-Based Biosensors. IEEE Trans Biomed Eng. 2011 Jun;58(6):1846-54.
Wanna GB, Noble JH, McRackan TR, Dawant BM, Dietrich MS, Watkins LD, Rivas A, Schuman TA, Labadie RF. Assessment of Electrode Placement and Audiological Outcomes in Bilateral Cochlear Implantation. Otol Neurotol. 2011 Apr;32(3):428-32.
2010
Balachandran R, Mitchell JE, Blachon G, Noble JH, Dawant BM, Fitzpatrick JM, Labadie RF. Percutaneous Cochlear Implant Drilling Via Customized Frames: An in Vitro Study. Otolaryngol Head Neck Surg. 2010 Mar;142(3):421-6.
Balachandran R, Welch EB, Dawant BM, Fitzpatrick JM. Effect of MR Distortion on Targeting for Deep-Brain Stimulation. IEEE Trans Biomed Eng. 2010 Jul;57(7):1729-35.
Chen A, Deeley MA, Niermann KJ, Moretti L, Dawant BM. Combining Registration and Active Shape Models for the Automatic Segmentation of the Lymph Node Regions in Head and Neck CT Images. Med Phys. 2010 Dec;37(12):6338-46.
D'Haese PF, Pallavaram S, Konrad PE, Neimat J, Fitzpatrick JM, Dawant BM. Clinical accuracy of a customized stereotactic platform for deep brain stimulation after accounting for brain shift. Stereotact Funct Neurosurg. 2010;88(2):81-7.
D'Haese PF, Pallavaram S, Li R, Remple MS, Kao C, Neimat JS, Konrad PE, Dawant BM. Cranialvault and Its Crave Tools: A Clinical Computer Assistance System for Deep Brain Stimulation (DBS) Therapy. Med Image Anal. 2012 Apr;16(3):744-53.
Danilchenko A, Wiles AD, Balachandran R, Fitzpatrick JM. Improved Method for Point-Based Tracking. Med Image Comput Comput Assist Interv. 2010;13(3):587-94.
Dumpuri P, Clements LW, Dawant BM, Miga MI. Model-Updated Image-Guided Liver Surgery: Preliminary Results Using Surface Characterization. Prog Biophys Mol Biol. 2010 Dec;103(2-3):197-207.
Dumpuri P, Thompson RC, Cao A, Ding S, Garg I, Dawant BM, Miga MI. A Fast and Efficient Method to Compensate for Brain Shift for Tumor Resection Therapies Measured between Preoperative and Postoperative Tomograms. IEEE Trans Biomed Eng. 2010 Jun;57(6):1285-96.
Fine HF, Wei W, Goldman R, Simaan N. Robot-Assisted Ophthalmic Surgery. Can J Ophthalmol. 2010 Dec;45(6):581-4.
Garty G, Chen Y, Salerno A, Turner H, Zhang J, Lyulko O, Bertucci A, Xu Y, Wang H, Simaan N, Randers-Pehrson G, Yao YL, Amundson SA, Brenner DJ. The Rabit: A Rapid Automated Biodosimetry Tool for Radiological Triage. Health Phys. 2010 Feb;98(2):209-17.
Labadie RF, Balachandran R, Mitchell JE, Noble JH, Majdani O, Haynes DS, Bennett ML, Dawant BM, Fitzpatrick JM. Clinical Validation Study of Percutaneous Cochlear Access Using Patient-Customized Microstereotactic Frames. Otol Neurotol. 2010 Jan;31(1):94-9.
Labadie RF, Clark NK, Cobb CM, Benningfield MM, Fuchs DC. Electroconvulsive Therapy in a Cochlear Implant Patient. Otol Neurotol. 2010 Jan;31(1):64-6.
Lahiri U, Labadie RF, Liu C, Balachandran R, Majdani O, Sarkar N. A Step toward Identification of Surgical Actions in Mastoidectomy. IEEE Trans Biomed Eng. 2010 Feb;57(2):479-87.
Lathrop RA, Hackworth DM, Webster RJ 3rd. Minimally Invasive Holographic Surface Scanning for Soft-Tissue Image Registration. IEEE Trans Biomed Eng. 2010 Jun;57(6):1497-506.
Li X, Dawant BM, Welch EB, Chakravarthy AB, Xu L, Mayer I, Kelley M, Meszoely I, Means-Powell J, Gore JC, Yankeelov TE. VValidation of an Algorithm for the Nonrigid Registration of Longitudinal Breast Mr Images Using Realistic Phantoms. Med Phys. 2010 Jun;37(6):2541-52.
Majdani O, Schuman TA, Haynes DS, Dietrich MS, Leinung M, Lenarz T, Labadie RF. Time of Cochlear Implant Surgery in Academic Settings. Otolaryngol Head Neck Surg. 2010 Feb;142(2):254-9.
Majdani O, Schurzig D, Hussong A, Rau T, Wittkopf J, Lenarz T, Labadie RF. Force Measurement of Insertion of Cochlear Implant Electrode Arrays in Vitro: Comparison of Surgeon to Automated Insertion Tool. Acta Otolaryngol. 2010;130(1):31-6.
Moore RD, Schuman TA, Scott TA, Mann SE, Davidson MA, Labadie RF. Exostoses of the External Auditory Canal in White-Water Kayakers. Laryngoscope. 2010 Mar;120(3):582-90.
Noble JH, Majdani O, Labadie RF, Dawant B, Fitzpatrick JM. Automatic Determination of Optimal Linear Drilling Trajectories for Cochlear Access Accounting for Drill-Positioning Error. Int J Med Robot. 2010 Sep;6(3):281-90.
Ong RE, Ou JJ, Miga MI. Non-Rigid Registration of Breast Surfaces Using the Laplace and Diffusion Equations. Biomed Eng Online. 2010 Feb 12;9:8.
Pallavaram S, Dawant BM, Remple MS, Neimat JS, Kao C, Konrad PE, D'Haese PF. Effect of Brain Shift on the Creation of Functional Atlases for Deep Brain Stimulation Surgery. Int J Comput Assist Radiol Surg. 2010 May;5(3):221-8.
Rucker DC, Jones BA, Webster RJ 3rd. A Geometrically Exact Model for Externally Loaded Concentric-Tube Continuum Robots. IEEE Trans Robot. 2010;26(5):769-780.
Schuman TA, Labadie RF. Concurrent Nasal Surgery and Tympanoplasty in Adults. Ear Nose Throat J. 2010 Oct;89(10):E28-32.
Schuman TA, Noble JH, Wright CG, Wanna GB, Dawant B, Labadie RF. Anatomic Verification of a Novel Method for Precise Intrascalar Localization of Cochlear Implant Electrodes in Adult Temporal Bones Using Clinically Available Computed Tomography. Laryngoscope. 2010 Nov;120(11):2277-83.
Schurzig D, Webster RJ 3rd, Dietrich MS, Labadie RF. Force of Cochlear Implant Electrode Insertion Performed by a Robotic Insertion Tool: Comparison of Traditional Versus Advance Off-Stylet Techniques. Otol Neurotol. 2010 Oct;31(8):1207-10.
Varol HA, Sup F, Goldfarb M. Multiclass Real-Time Intent Recognition of a Powered Lower Limb Prosthesis. IEEE Trans Biomed Eng. 2010 Mar;57(3):542-51.
Weis JA, Miga MI, Granero-Moltó F, Spagnoli A. A Finite Element Inverse Analysis to Assess Functional Improvement During the Fracture Healing Process. J Biomech. 2010 Feb 10;43(3):557-62.
Zhang J, Wei W, Ding J, Roland JT Jr, Manolidis S, Simaan N. Inroads toward Robot-Assisted Cochlear Implant Surgery Using Steerable Electrode Arrays. Otol Neurotol. 2010 Oct;31(8):1199-206.
2009
Balachandran R, Mitchell JE, Dawant BM, Fitzpatrick JM. Accuracy Evaluation of Microtargeting Platforms for Deep-Brain Stimulation Using Virtual Targets. IEEE Trans Biomed Eng. 2009 Jan;56(1):37-44.
Barnes SL, Young PP, Miga MI. A Novel Model-Gel-Tissue Assay Analysis for Comparing Tumor Elastic Properties to Collagen Content. Biomech Model Mechanobiol. 2009 Aug;8(4):337-43.
Chen CC, Miga MI, Galloway RL Jr. Optimizing Electrode Placement Using Finite-Element Models in Radiofrequency Ablation Treatment Planning. IEEE Trans Biomed Eng. 2009 Feb;56(2):237-45.
Ding S, Miga MI, Noble JH, Cao A, Dumpuri P, Thompson RC, Dawant BM. Semiautomatic Registration of Pre- and Postbrain Tumor Resection Laser Range Data: Method and Validation. IEEE Trans Biomed Eng. 2009 Mar;56(3):770-80.
Granero-Moltó F, Weis JA, Miga MI, Landis B, Myers TJ, O'Rear L, Longobardi L, Jansen ED, Mortlock DP, Spagnoli A. Regenerative Effects of Transplanted Mesenchymal Stem Cells in Fracture Healing. Stem Cells. 2009 Aug;27(8):1887-98.
Heimann T, van Ginneken B, Styner MA, Arzhaeva Y, Aurich V, Bauer C, Beck A, Becker C, Beichel R, Bekes G, Bello F, Binnig G, Bischof H, Bornik A, Cashman PM, Chi Y, Cordova A, Dawant BM, Fidrich M, Furst JD, Furukawa D, Grenacher L, Hornegger J, Kainmüller D, Kitney RI, Kobatake H, Lamecker H, Lange T, Lee J, Lennon B, Li R, Li S, Meinzer HP, Nemeth G, Raicu DS, Rau AM, van Rikxoort EM, Rousson M, Rusko L, Saddi KA, Schmidt G, Seghers D, Shimizu A, Slagmolen P, Sorantin E, Soza G, Susomboon R, Waite JM, Wimmer A, Wolf I. Comparison and Evaluation of Methods for Liver Segmentation from CT Datasets. IEEE Trans Med Imaging. 2009 Aug;28(8):1251-65.
Herrell SD, Kwartowitz DM, Milhoua PM, Galloway RL. Toward Image Guided Robotic Surgery: System Validation. J Urol. 2009 Feb;181(2):783-9; discussion 789-90.
Kwartowitz DM, Galloway RL Jr, Shiavi RG. Determining the Presence of Bias Error Using Statistical Methods. IEEE Trans Inf Technol Biomed. 2009 Jan;13(1):1-4.
Kwartowitz DM, Miga MI, Herrell SD, Galloway RL. Towards Image Guided Robotic Surgery: Multi-Arm Tracking through Hybrid Localization. Int J Comput Assist Radiol Surg. 2009 May;4(3):281-6.
Labadie RF, Mitchell J, Balachandran R, Fitzpatrick JM. Customized, Rapid-Production Microstereotactic Table for Surgical Targeting: Description of Concept and In Vitro Validation. Int J Comput Assist Radiol Surg. 2009 May;4(3):273-80.
Li X, Dawant BM, Welch EB, Chakravarthy AB, Freehardt D, Mayer I, Kelley M, Meszoely I, Gore JC, Yankeelov TE. A Nonrigid Registration Algorithm for Longitudinal Breast MR Images and the Analysis of Breast Tumor Response. Magn Reson Imaging. 2009 Nov;27(9):1258-70.
Li X, Yankeelov TE, Rosen GD, Gore JC, Dawant BM. Enhancement of Histological Volumes through Averaging and Their Use for the Analysis of Magnetic Resonance Images. Magn Reson Imaging. 2009 Apr;27(3):401-16.
Majdani O, Wittkopf J, Dietrich MS, Labadie RF. Penetration of Co2 Laser into the Otic Capsule Using a Hand-Held, Flexible-Fiber Delivery System. Lasers Surg Med. 2009 Sep;41(7):509-13.
Noble JH, Dawant BM, Warren FM, Labadie RF. Automatic Identification and 3D Rendering of Temporal Bone Anatomy. Otol Neurotol. 2009 Jun;30(4):436-42.
Pallavaram S, Dawant BM, Koyama T, Yu H, Neimat J, Konrad PE, D'Haese PF. Validation of a Fully Automatic Method for the Routine Selection of the Anterior and Posterior Commissures in Magnetic Resonance Images. Stereotact Funct Neurosurg. 2009;87(3):148-54.
Pallavaram S, Dawant BM, Li R, Neimat JS, Remple MS, Kao C, Konrad PE, D'Haese PF. A Method to Correct for Brain Shift When Building Electrophysiological Atlases for Deep Brain Stimulation (DBS) Surgery. Med Image Comput Comput Assist Interv. 2009;12(Pt 1):557-64.
Simaan N, Xu K, Kapoor A, Wei W, Kazanzides P, Flint P, Taylor R. Design and Integration of a Telerobotic System for Minimally Invasive Surgery of the Throat. Int J Rob Res. 2009 Sep 1;28(9):1134-1153.
Sup F, Varol HA, Mitchell J, Withrow TJ, Goldfarb M. Preliminary Evaluations of a Self-Contained Anthropomorphic Transfemoral Prosthesis. IEEE ASME Trans Mechatron. 2009;14(6):667-676.
Tortora G, Valdastri P, Susilo E, Menciassi A, Dario P, Rieber F, Schurr MO. Propeller-Based Wireless Device for Active Capsular Endoscopy in the Gastric District. Minim Invasive Ther Allied Technol. 2009;18(5):280-90.
Wanna GB, Balachandran R, Majdani O, Mitchell J, Labadie RF. Percutaneous Access to the Petrous Apex in Vitro Using Customized Micro-Stereotactic Frames Based on Image-Guided Surgical Technology. Acta Otolaryngol. 2009 Aug 25:1-6.
2008
Atuegwu NC, Galloway RL. Volumetric Characterization of the Aurora Magnetic Tracker System for Image-Guided Transorbital Endoscopic Procedures. Phys Med Biol. 2008 Aug 21;53(16):4355-68.
Balachandran R, Fitzpatrick JM, Labadie RF. Accuracy of Image-Guided Surgical Systems at the Lateral Skull Base as Clinically Assessed Using Bone-Anchored Hearing Aid Posts as Surgical Targets. Otol Neurotol. 2008 Dec;29(8):1050-5.
Benincasa AB, Clements LW, Herrell SD, Galloway RL. Feasibility Study for Image-Guided Kidney Surgery: Assessment of Required Intraoperative Surface for Accurate Physical to Image Space Registrations. Med Phys. 2008 Sep;35(9):4251-61.
Buss E, Pillsbury HC, Buchman CA, Pillsbury CH, Clark MS, Haynes DS, Labadie RF, Amberg S, Roland PS, Kruger P, Novak MA, Wirth JA, Black JM, Peters R, Lake J, Wackym PA, Firszt JB, Wilson BS, Lawson DT, Schatzer R, D'Haese PS, Barco AL. Multicenter U.S. Bilateral Med-El Cochlear Implantation Study: Speech Perception over the First Year of Use. Ear Hear. 2008 Jan;29(1):20-32.
Cao A, Thompson RC, Dumpuri P, Dawant BM, Galloway RL, Ding S, Miga MI. Laser Range Scanning for Image-Guided Neurosurgery: Investigation of Image-to-Physical Space Registrations. Med Phys. 2008 Apr;35(4):1593-605.
Clements LW, Chapman WC, Dawant BM, Galloway RL Jr, Miga MI. Robust Surface Registration Using Salient Anatomical Features for Image-Guided Liver Surgery: Algorithm and Validation. Med Phys. 2008 Jun;35(6):2528-40.
Cutler JL, Labadie RF. Effects of Ototopical Antihistamine on Otitis Media in an Allergic Rat. Laryngoscope. 2008 Feb;118(2):283-7.
Falcone MT, Kaylie DM, Labadie RF, Haynes DS. Bone-Anchored Hearing Aid Abutment Skin Overgrowth Reduction with Clobetasol. Otolaryngol Head Neck Surg. 2008 Dec;139(6):829-32.
French LC, Dietrich MS, Labadie RF. An Estimate of the Number of Mastoidectomy Procedures Performed Annually in the United States. Ear Nose Throat J. 2008 May;87(5):267-70.
Grantham DW, Ashmead DH, Ricketts TA, Haynes DS, Labadie RF. Interaural Time and Level Difference Thresholds for Acoustically Presented Signals in Post-Lingually Deafened Adults Fitted with Bilateral Cochlear Implants Using Cis+ Processing. Ear Hear. 2008 Jan;29(1):33-44.
Grantham DW, Ricketts TA, Ashmead DH, Labadie RF, Haynes DS. Localization by Postlingually Deafened Adults Fitted with a Single Cochlear Implant. Laryngoscope. 2008 Jan;118(1):145-51.
Hillel AT, Kapoor A, Simaan N, Taylor RH, Flint P. Applications of Robotics for Laryngeal Surgery. Otolaryngol Clin North Am. 2008 Aug;41(4):781-91, vii.
Labadie RF, Noble JH, Dawant BM, Balachandran R, Majdani O, Fitzpatrick JM. Clinical Validation of Percutaneous Cochlear Implant Surgery: Initial Report. Laryngoscope. 2008 Jun;118(6):1031-9.
Li X, Yankeelov TE, Peterson TE, Gore JC, Dawant BM. Automatic Nonrigid Registration of Whole Body Ct Mice Images. Med Phys. 2008 Apr;35(4):1507-20.
Li Y, Xu N, Fitzpatrick JM, Dawant BM. Geometric Distortion Correction for Echo Planar Images Using Nonrigid Registration with Spatially Varying Scale. Magn Reson Imaging. 2008 Dec;26(10):1388-97.
Noble JH, Warren FM, Labadie RF, Dawant BM. Automatic Segmentation of the Facial Nerve and Chorda Tympani in Ct Images Using Spatially Dependent Feature Values. Med Phys. 2008 Dec;35(12):5375-84.
Ou JJ, Ong RE, Yankeelov TE, Miga MI. Evaluation of 3d Modality-Independent Elastography for Breast Imaging: A Simulation Study. Phys Med Biol. 2008 Jan 7;53(1):147-63.
Pallavaram S, Yu H, Spooner J, D'Haese PF, Bodenheimer B, Konrad PE, Dawant BM. Intersurgeon Variability in the Selection of Anterior and Posterior Commissures and Its Potential Effects on Target Localization. Stereotact Funct Neurosurg. 2008;86(2):113-9.
Riddle WR, DonLevy SC, Wushensky CA, Dawant BM, Fitzpatrick JM, Price RR. Quantifying Cerebral Changes in Adolescence with MRI and Deformation Based Morphometry. J Magn Reson Imaging. 2008 Aug;28(2):320-6.
Sanchez GB, Kaylie DM, O'Malley MR, Labadie RF, Jackson CG, Haynes DS. Chemical Meningitis Following Cerebellopontine Angle Tumor Surgery. Otolaryngol Head Neck Surg. 2008 Mar;138(3):368-73.
Sinha TK, Khatib-Shahidi S, Yankeelov TE, Mapara K, Ehtesham M, Cornett DS, Dawant BM, Caprioli RM, Gore JC. Integrating Spatially Resolved Three-Dimensional Maldi IMS with in Vivo Magnetic Resonance Imaging. Nat Methods. 2008 Jan;5(1):57-9.
Sup F, Bohara A, Goldfarb M. Design and Control of a Powered Transfemoral Prosthesis. Int J Rob Res. 2008 Feb 1;27(2):263-273.
Valdastri P, Menciassi A, Dario P. Transmission Power Requirements for Novel Zigbee Implants in the Gastrointestinal Tract. IEEE Trans Biomed Eng. 2008 Jun;55(6):1705-10.
Zhang J, Wei W, Manolidis S, Roland JT Jr, Simaan N. Path Planning and Workspace Determination for Robot-Assisted Insertion of Steerable Electrode Arrays for Cochlear Implant Surgery. Med Image Comput Comput Assist Interv. 2008;11(Pt 2):692-700.
2007
Bao P, Sinha TK, Chen CC, Warmath JR, Galloway RL, Herline AJ. A Prototype Ultrasound-Guided Laparoscopic Radiofrequency Ablation System. Surg Endosc. 2007 Jan;21(1):74-9.
Barnes SL, Lyshchik A, Washington MK, Gore JC, Miga MI. Development of a Mechanical Testing Assay for Fibrotic Murine Liver. Med Phys. 2007 Nov;34(11):4439-50.
Cash DM, Miga MI, Glasgow SC, Dawant BM, Clements LW, Cao Z, Galloway RL, Chapman WC. Concepts and Preliminary Data toward the Realization of Image-Guided Liver Surgery. J Gastrointest Surg. 2007 Jul;11(7):844-59.
Chen CC, Miga MI, Galloway RL. Characterization of Tracked Radiofrequency Ablation in Phantom. Med Phys. 2007 Oct;34(10):4030-40.
Ding S, Miga MI, Thompson RC, Dumpuri P, Cao A, Dawant BM. Estimation of Intra-Operative Brain Shift Using a Tracked Laser Range Scanner. Conf Proc IEEE Eng Med Biol Soc. 2007;2007:848-51.
Dumpuri P, Thompson RC, Dawant BM, Cao A, Miga MI. An Atlas-Based Method to Compensate for Brain Shift: Preliminary Results. Med Image Anal. 2007 Apr;11(2):128-45.
Falcone MT, Labadie RF. An Alternate Approach for Surgical Dressing of Bone-Anchored Hearing Aid Abutment Sites. Laryngoscope. 2007 Apr;117(4):614-6.
Galloway RL. Found in Translation; from the Laboratory to the Operating Room to the Market. Conf Proc IEEE Eng Med Biol Soc. 2007;2007:5162-5.
Grantham DW, Ashmead DH, Ricketts TA, Labadie RF, Haynes DS. Horizontal-Plane Localization of Noise and Speech Signals by Postlingually Deafened Adults Fitted with Bilateral Cochlear Implants. Ear Hear. 2007 Aug;28(4):524-41.
Haynes DS, O'Malley M, Cohen S, Watford K, Labadie RF. Intratympanic Dexamethasone for Sudden Sensorineural Hearing Loss after Failure of Systemic Therapy. Laryngoscope. 2007 Jan;117(1):3-15.
Labadie RF, Majdani O, Fitzpatrick JM. Image-Guided Technique in Neurotology. Otolaryngol Clin North Am. 2007 Jun;40(3):611-24, x.
Li Y, Xu N, Fitzpatrick JM, Morgan VL, Pickens DR, Dawant BM. Accounting for Signal Loss Due to Dephasing in the Correction of Distortions in Gradient-Echo Epi Via Nonrigid Registration. IEEE Trans Med Imaging. 2007 Dec;26(12):1698-707.
Lyshchik A, Moses R, Barnes SL, Higashi T, Asato R, Miga MI, Gore JC, Fleischer AC. Quantitative Analysis of Tumor Vascularity in Benign and Malignant Solid Thyroid Nodules. J Ultrasound Med. 2007 Jun;26(6):837-46.
Morgan VL, Dawant BM, Li Y, Pickens DR. Comparison of Fmri Statistical Software Packages and Strategies for Analysis of Images Containing Random and Stimulus-Correlated Motion. Comput Med Imaging Graph. 2007 Sep;31(6):436-46.
Quirini M, Scapellato S, Valdastri P, Menciassi A, Dario P. An Approach to Capsular Endoscopy with Active Motion. Conf Proc IEEE Eng Med Biol Soc. 2007;2007:2827-30.
Rauth TP, Bao PQ, Galloway RL, Bieszczad J, Friets EM, Knaus DA, Kynor DB, Herline AJ. Laparoscopic Surface Scanning and Subsurface Targeting: Implications for Image-Guided Laparoscopic Liver Surgery. Surgery. 2007 Aug;142(2):207-14.
Skerl D, Likar B, Fitzpatrick JM, Pernus F. Comparative Evaluation of Similarity Measures for the Rigid Registration of Multi-Modal Head Images. Phys Med Biol. 2007 Sep 21;52(18):5587-601.
Warren FM, Balachandran R, Fitzpatrick JM, Labadie RF. Percutaneous Cochlear Access Using Bone-Mounted, Customized Drill Guides: Demonstration of Concept in Vitro. Otol Neurotol. 2007 Apr;28(3):325-9.
Xu N, Fitzpatrick JM, Li Y, Dawant BM, Pickens DR, Morgan VL. Computer-Generated Fmri Phantoms with Motion-Distortion Interaction. Magn Reson Imaging. 2007 Dec;25(10):1376-84.
2006
Cutler JL, Wall M, Labadie RF. Effects of Ototopic Steroid and NSAIDS in Clearing Middle Ear Effusion in an Animal Model. Otolaryngol Head Neck Surg. 2006 Oct;135(4):585-9.
O'Malley MR, Wittkopf JE, Cutler JL, Labadie RF, Hackett TA, Haynes DS. Fluorescent Retrograde Axonal Tracing of the Facial Nerve. Laryngoscope. 2006 Oct;116(10):1792-7.
Ricketts TA, Grantham DW, Ashmead DH, Haynes DS, Labadie RF. Speech Recognition for Unilateral and Bilateral Cochlear Implant Modes in the Presence of Uncorrelated Noise Sources. Ear Hear. 2006 Dec;27(6):763-73.
Sinha TK, Miga MI, Cash DM, Weil RJ. Intraoperative Cortical Surface Characterization Using Laser Range Scanning: Preliminary Results. Neurosurgery. 2006 Oct;59(4 Suppl 2):ONS368-76; discussion ONS376-7.
Valdastri P, Harada K, Menciassi A, Beccai L, Stefanini C, Fujie M, Dario P. Integration of a Miniaturised Triaxial Force Sensor in a Minimally Invasive Surgical Tool. IEEE Trans Biomed Eng. 2006 Nov;53(11):2397-400.
Wootten CT, Labadie RF, Chen A, Lane KF. Differential Expression of Surfactant Protein A in the Nasal Mucosa of Patients with Allergy Symptoms. Arch Otolaryngol Head Neck Surg. 2006 Sep;132(9):1001-7.
Zhang J, Xu K, Simaan N, Manolidis S. A Pilot Study of Robot-Assisted Cochlear Implant Surgery Using Steerable Electrode Arrays. Med Image Comput Comput Assist Interv. 2006;9(Pt 1):33-40.
2005
Cash DM, Miga MI, Sinha TK, Galloway RL, Chapman WC. Compensating for Intraoperative Soft-Tissue Deformations Using Incomplete Surface Data and Finite Elements. IEEE Trans Med Imaging. 2005 Nov;24(11):1479-91.
Cohen SM, Labadie RF, Haynes DS. Primary Care Approach to Hearing Loss: The Hidden Disability. Ear Nose Throat J. 2005 Jan;84(1):26, 29-31, 44.
Crecelius AC, Cornett DS, Caprioli RM, Williams B, Dawant BM, Bodenheimer B. Three-Dimensional Visualization of Protein Expression in Mouse Brain Structures Using Imaging Mass Spectrometry. J Am Soc Mass Spectrom. 2005 Jul;16(7):1093-9.
D'Haese PF, Cetinkaya E, Konrad PE, Kao C, Dawant BM. Computer-Aided Placement of Deep Brain Stimulators: From Planning to Intraoperative Guidance. IEEE Trans Med Imaging. 2005 Nov;24(11):1469-78.
D'Haese PF, Pallavaram S, Niermann K, Spooner J, Kao C, Konrad PE, Dawant BM. Automatic Selection of Dbs Target Points Using Multiple Electrophysiological Atlases. Med Image Comput Comput Assist Interv. 2005;8(Pt 2):427-34.
Fitzpatrick JM, Konrad PE, Nickele C, Cetinkaya E, Kao C. Accuracy of Customized Miniature Stereotactic Platforms. SStereotact Funct Neurosurg. 2005;83(1):25-31.
Gebhart SC, Jansen ED, Galloway RL. Dynamic, Three-Dimensional Optical Tracking of an Ablative Laser Beam. Med Phys. 2005 Jan;32(1):209-20.
Hao M, Li X, Rizzo MA, Rocheleau JV, Dawant BM, Piston DW. Regulation of Two Insulin Granule Populations within the Reserve Pool by Distinct Calcium Sources. J Cell Sci. 2005 Dec 15;118(Pt 24):5873-84.
Haynes DS, Vos JD, Labadie RF. Acellular Allograft Dermal Matrix for Tympanoplasty. Curr Opin Otolaryngol Head Neck Surg. 2005 Oct;13(5):283-6.
Hermoye L, Laamari-Azjal I, Cao Z, Annet L, Lerut J, Dawant BM, Van Beers BE. Liver Segmentation in Living Liver Transplant Donors: Comparison of Semiautomatic and Manual Methods. Radiology. 2005 Jan;234(1):171-8.
Labadie RF, Chodhury P, Cetinkaya E, Balachandran R, Haynes DS, Fenlon MR, Jusczyzck AS, Fitzpatrick JM. Minimally Invasive, Image-Guided, Facial-Recess Approach to the Middle Ear: Demonstration of the Concept of Percutaneous Cochlear Access in Vitro. Otol Neurotol. 2005 Jul;26(4):557-62.
Labadie RF, Davis BM, Fitzpatrick JM. Image-Guided Surgery: What Is the Accuracy? Curr Opin Otolaryngol Head Neck Surg. 2005 Feb;13(1):27-31.
Labadie RF, Shah RJ, Harris SS, Cetinkaya E, Haynes DS, Fenlon MR, Juszczyk AS, Galloway RL, Fitzpatrick JM. In Vitro Assessment of Image-Guided Otologic Surgery: Submillimeter Accuracy within the Region of the Temporal Bone. Otolaryngol Head Neck Surg. 2005 Mar;132(3):435-42.
Miga MI, Rothney MP, Ou JJ. Modality Independent Elastography (Mie): Potential Applications in Dermoscopy. Med Phys. 2005 May;32(5):1308-20.
Pickens DR, Li Y, Morgan VL, Dawant BM. Development of Computer-Generated Phantoms for Fmri Software Evaluation. Magn Reson Imaging. 2005 Jun;23(5):653-63.
Rohde GK, Dawant BM, Lin SF. Correction of Motion Artifact in Cardiac Optical Mapping Using Image Registration. IEEE Trans Biomed Eng. 2005 Feb;52(2):338-41.
Sinha TK, Dawant BM, Duay V, Cash DM, Weil RJ, Thompson RC, Weaver KD, Miga MI. A Method to Track Cortical Surface Deformations Using a Laser Range Scanner. IEEE Trans Med Imaging. 2005 Jun;24(6):767-81.
Vos JD, Latev MD, Labadie RF, Cohen SM, Werkhaven JA, Haynes DS. Use of Alloderm in Type I Tympanoplasty: A Comparison with Native Tissue Grafts. Laryngoscope. 2005 Sep;115(9):1599-602.
Warmath JR, Bao P, Clements LW, Herline AJ, Galloway RL. Development of a Three-Dimensional Freehand Endorectal Ultrasound System for Use in Rectal Cancer Imaging. Med Phys. 2005 Jun;32(6):1757-66.
2004
Boctor EM, Webster RJ 3rd, Mathieu H, Okamura AM, Fichtinger G. Virtual Remote Center of Motion Control for Needle Placement Robots. Comput Aided Surg. 2004;9(5):175-83.
Cao Z, Pan S, Li R, Balachandran R, Fitzpatrick JM, Chapman WC, Dawant BM. Registration of Medical Images Using an Interpolated Closest Point Transform: Method and Validation. Med Image Anal. 2004 Dec;8(4):421-7.
Cohen SM, Labadie RF, Dietrich MS, Haynes DS. Quality of Life in Hearing-Impaired Adults: The Role of Cochlear Implants and Hearing Aids. Otolaryngol Head Neck Surg. 2004 Oct;131(4):413-22.
Davis BM, Labadie RF, McMenomey SO, Haynes DS. Cochlear Implant Fixation Using Polypropylene Mesh and Titanium Screws. Laryngoscope. 2004 Dec;114(12):2116-8.
Grogan EL, Morris JA Jr, Norris PR, France DJ, Ozdas A, Stiles RA, Harris PA, Dawant BM, Speroff T. Reduced Heart Rate Volatility: An Early Predictor of Death in Trauma Patients. Ann Surg. 2004 Sep;240(3):547-54; discussion 554-6.
Labadie RF, Shah RJ, Harris SS, Cetinkaya E, Haynes DS, Fenlon MR, Juscyzk AS, Galloway RL, Fitzpatrick JM. Submillimetric Target-Registration Error Using a Novel, Non-Invasive Fiducial System for Image-Guided Otologic Surgery. Comput Aided Surg. 2004;9(4):145-53.
Lavely WC, Scarfone C, Cevikalp H, Li R, Byrne DW, Cmelak AJ, Dawant B, Price RR, Hallahan DE, Fitzpatrick JM. Phantom Validation of Coregistration of Pet and Ct for Image-Guided Radiotherapy. Med Phys. 2004 May;31(5):1083-92.
Riddle WR, Li R, Fitzpatrick JM, DonLevy SC, Dawant BM, Price RR. Characterizing Changes in MR Images with Color-Coded Jacobians. Magn Reson Imaging. 2004 Jul;22(6):769-77.
Valdastri P, Menciassi A, Arena A, Caccamo C, Dario P. An Implantable Telemetry Platform System for in Vivo Monitoring of Physiological Parameters. IEEE Trans Inf Technol Biomed. 2004 Sep;8(3):271-8.
Yoder DA, Zhao Y, Paschal CB, Fitzpatrick JM. MRI Simulator with Object-Specific Field Map Calculations. Magn Reson Imaging. 2004 Apr;22(3):315-28.
2003
Cash DM, Sinha TK, Chapman WC, Terawaki H, Dawant BM, Galloway RL, Miga MI. Incorporation of a Laser Range Scanner into Image-Guided Liver Surgery: Surface Acquisition, Registration, and Tracking. Med Phys. 2003 Jul;30(7):1671-82.
Fitzpatrick JM, Gedaka KA. Success Through Collaboration. Environ Sci Technol. 2003 Dec 1;37(23):442A-448A.
Goldfarb M, Korkowski K, Harrold B, Durfee W. Preliminary Evaluation of a Controlled-Brake Orthosis for Fes-Aided Gait. IEEE Trans Neural Syst Rehabil Eng. 2003 Sep;11(3):241-8.
Miga MI, Sinha TK, Cash DM, Galloway RL, Weil RJ. Cortical Surface Registration for Image-Guided Neurosurgery Using Laser-Range Scanning. IEEE Trans Med Imaging. 2003 Aug;22(8):973-85.
Miga MI. A New Approach to Elastography Using Mutual Information and Finite Elements. Phys Med Biol. 2003 Feb 21;48(4):467-80.
Pluim JP, Fitzpatrick JM. Image Registration. IEEE Trans Med Imaging. 2003 Nov;22(11):1341-3.
Rohde GK, Aldroubi A, Dawant BM. The Adaptive Bases Algorithm for Intensity-Based Nonrigid Image Registration. IEEE Trans Med Imaging. 2003 Nov;22(11):1470-9.
2002
Buss E, Labadie RF, Brown CJ, Gross AJ, Grose JH, Pillsbury HC. Outcome of Cochlear Implantation in Pediatric Auditory Neuropathy. Otol Neurotol. 2002 May;23(3):328-32.
Cash DM, Palmisano MG, Galloway RL. Centroid-Based Maximum Intensity Projections. J Comput Assist Tomogr. 2002 Jan-Feb;26(1):73-83.
Dawant BM, Hartmann SL, Pan S, Gadamsetty S. Brain Atlas Deformation in the Presence of Small and Large Space-Occupying Tumors. Comput Aided Surg. 2002;7(1):1-10.
Haynes DS, Resser JR, Labadie RF, Girasole CR, Kovach BT, Scheker LE, Walker DC. Treatment of Benign Positional Vertigo Using the Semont Maneuver: Efficacy in Patients Presenting without Nystagmus. Laryngoscope. 2002 May;112(5):796-801.
Jannin P, Fitzpatrick JM, Hawkes DJ, Pennec X, Shahidi R, Vannier MW. Validation of Medical Image Processing in Image-Guided Therapy. IEEE Trans Med Imaging. 2002 Dec;21(12):1445-9.
Miga MI, Kerner TE, Darcey TM. Source Localization Using a Current-Density Minimization Approach. IEEE Trans Biomed Eng. 2002 Jul;49(7):743-5.
Muratore DM, Russ JH, Dawant BM, Galloway RL Jr. Three-Dimensional Image Registration of Phantom Vertebrae for Image-Guided Surgery: A Preliminary Study. Comput Aided Surg. 2002;7(6):342-52.
Parks MH, Dawant BM, Riddle WR, Hartmann SL, Dietrich MS, Nickel MK, Price RR, Martin PR. Longitudinal Brain Metabolic Characterization of Chronic Alcoholics with Proton Magnetic Resonance Spectroscopy. Alcohol Clin Exp Res. 2002 Sep;26(9):1368-80.
Platenik LA, Miga MI, Roberts DW, Lunn KE, Kennedy FE, Hartov A, Paulsen KD. In Vivo Quantification of Retraction Deformation Modeling for Updated Image-Guidance During Neurosurgery. IEEE Trans Biomed Eng. 2002 Aug;49(8):823-35.
Poliakoff M, Fitzpatrick JM, Farren TR, Anastas PT. Green Chemistry: Science and Politics of Change. Science. 2002 Aug 2;297(5582):807-10.
Stefansic JD, Bass WA, Hartmann SL, Beasley RA, Sinha TK, Cash DM, Herline AJ, Galloway RL Jr. Design and Implementation of a Pc-Based Image-Guided Surgical System. Comput Methods Programs Biomed. 2002 Nov;69(3):211-24.
2001
Fitzpatrick JM, West JB. The Distribution of Target Registration Error in Rigid-Body Point-Based Registration. IEEE Trans Med Imaging. 2001 Sep;20(9):917-27.
Herring JL, Dawant BM. Automatic Lumbar Vertebral Identification Using Surface-Based Registration. J Biomed Inform. 2001 Apr;34(2):74-84.
West JB, Fitzpatrick JM, Toms SA, Maurer CR Jr, Maciunas RJ. Fiducial Point Placement and the Accuracy of Point-Based, Rigid Body Registration. Neurosurgery. 2001 Apr;48(4):810-6; discussion 816-7.
2000
Herline AJ, Herring JL, Stefansic JD, Chapman WC, Galloway RL Jr, Dawant BM. Surface Registration for Use in Interactive, Image-Guided Liver Surgery. Comput Aided Surg. 2000;5(1):11-7.
Miga MI, Paulsen KD, Kennedy FE, Hoopes PJ, Hartov A, Roberts DW. In Vivo Analysis of Heterogeneous Brain Deformation Computations for Model-Updated Image Guidance. Comput Methods Biomech Biomed Engin. 2000;3(2):129-146.
Stefansic JD, Herline AJ, Shyr Y, Chapman WC, Fitzpatrick JM, Dawant BM, Galloway RL Jr. Registration of Physical Space to Laparoscopic Image Space for Use in Minimally Invasive Hepatic Surgery. IEEE Trans Med Imaging. 2000 Oct;19(10):1012-23.

Tian Q, Ferrucci L, Resnick SM, Simonsick EM, Shardell MD, Landman BA, Venkatraman VK, Gonzalez CE, Studenski SA. The effect of age and microstructural white matter integrity on lap time variation and fast-paced walking speed. Brain Imaging Behav. 2015 Sep 23. [Epub ahead of print]