Research
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Eosinophils Instance Object Segmentation on Whole Slide Imaging Using Multi-label Circle Representation
Yilin Liu, Ruining Deng, Juming Xiong, Regina N. Tyree, Hernan Correa, Girish Hiremath, Yaohong Wang, and Yuankai Huo. “Eosinophils Instance Object Segmentation on Whole Slide Imaging Using Multi-label Circle Representation.” Proceedings of SPIE Medical Imaging 2024: Digital and Computational Pathology, vol. 12933, 129330I, 2024. Eosinophilic esophagitis (EoE) is… Read MoreJun. 20, 2024
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FNPC-SAM: Uncertainty-Guided False Negative/Positive Control for SAM on Noisy Medical Images
Xing Yao, Han Liu, Dewei Hu, Daiwei Lu, Ange Lou, Hao Li, Ruining Deng, Gabriel Arenas, Baris Oguz, Nadav Schwartz, Brett C. Byram, and Ipek Oguz. “FNPC-SAM: Uncertainty-guided False Negative/Positive Control for SAM on Noisy Medical Images.” Proceedings of SPIE Medical Imaging 2024: Image Processing, vol. 12926, 1292602, 2024,… Read MoreJun. 20, 2024
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All-in-SAM: From Weak Annotation to Pixel-wise Nuclei Segmentation with Prompt-based Finetuning
Can Cui, Ruining Deng, Quan Liu, Tianyuan Yao, Shunxing Bao, Lucas W. Remedios, Bennett A. Landman, Yucheng Tang, and Yuankai Huo. “All-in-SAM: from Weak Annotation to Pixel-wise Nuclei Segmentation with Prompt-based Finetuning.” Journal of Physics: Conference Series, vol. 2722, 2023, The 4th Asia Conference on Computers and Communications (ACCC… Read MoreJun. 20, 2024
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Comprehensive behavioral and physiologic assessment of peripheral and central auditory function in individuals with mild traumatic brain injury
Stahl, A. N., Racca, J. M., Kerley, C. I., Anderson, A., Landman, B., Hood, L. J., Gifford, R. H., & Rex, T. S. (2024). Comprehensive behavioral and physiologic assessment of peripheral and central auditory function in individuals with mild traumatic brain injury. Hearing Research, 441. https://doi.org/10.1016/J.HEARES.2023.108928 The… Read MoreApr. 22, 2024
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A deep neural network estimation of brain age is sensitive to cognitive impairment and decline
Yang, Y., Sathe, A., Schilling, K., Shashikumar, N., Moore, E., Dumitrescu, L., Pechman, K. R., Landman, B. A., Gifford, K. A., Hohman, T. J., Jefferson, A. L., & Archer, D. B. (2024). A deep neural network estimation of brain age is sensitive to cognitive impairment and decline. Read MoreApr. 22, 2024
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Phenotyping Down syndrome: discovery and predictive modelling with electronic medical records
Nguyen, T. Q., Kerley, C. I., Key, A. P., Maxwell-Horn, A. C., Wells, Q. S., Neul, J. L., Cutting, L. E., & Landman, B. A. (2024). Phenotyping Down syndrome: discovery and predictive modelling with electronic medical records. Journal of Intellectual Disability Research. https://doi.org/10.1111/JIR.13124 A comprehensive two-part study… Read MoreApr. 22, 2024
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Lung CT harmonization of paired reconstruction kernel images using generative adversarial networks
Krishnan, A. R., Xu, K., Li, T. Z., Remedios, L. W., Sandler, K. L., Maldonado, F., & Landman, B. A. (2024). Lung CT harmonization of paired reconstruction kernel images using generative adversarial networks. Medical Physics. https://doi.org/10.1002/MP.17028 In a study focused on the harmonization of reconstruction kernels in… Read MoreApr. 22, 2024
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The mediation roles of intermuscular fat and inflammation in muscle mitochondrial associations with cognition and mobility
Tian, Q., Lee, P. R., Yang, Q., Moore, A. Z., Landman, B. A., Resnick, S. M., & Ferrucci, L. (2024). The mediation roles of intermuscular fat and inflammation in muscle mitochondrial associations with cognition and mobility. Journal of Cachexia, Sarcopenia and Muscle, 15(1), 138–148. https://doi.org/10.1002/JCSM.13413 A study… Read MoreApr. 22, 2024
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Metrics reloaded: recommendations for image analysis validation
Maier-Hein, L., Reinke, A., Godau, P., Tizabi, M. D., Buettner, F., Christodoulou, E., Glocker, B., Isensee, F., Kleesiek, J., Kozubek, M., Reyes, M., Riegler, M. A., Wiesenfarth, M., Kavur, A. E., Sudre, C. H., Baumgartner, M., Eisenmann, M., Heckmann-Nötzel, D., Rädsch, T., … Jäger, P. F. (2024). Read MoreApr. 22, 2024
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Understanding metric-related pitfalls in image analysis validation
Reinke, A., Tizabi, M. D., Baumgartner, M., Eisenmann, M., Heckmann-Nötzel, D., Kavur, A. E., Rädsch, T., Sudre, C. H., Acion, L., Antonelli, M., Arbel, T., Bakas, S., Benis, A., Buettner, F., Cardoso, M. J., Cheplygina, V., Chen, J., Christodoulou, E., Cimini, B. A., … Maier-Hein, L. (2024). Read MoreApr. 22, 2024